RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 ATP8B2P98198 1209 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 IDI1Q13907 227 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 RBM43Q6ZSC3 357 aaKnown RBP11.53□□□□□ -0.56
TCF4-208ENST00000543082 CCDC83Q8IWF9 413 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 IL25Q9H293 177 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 ADGRL3Q9HAR2 1447 aa11.52□□□□□ -0.56
TCF4-208ENST00000543082 VPS37CA5D8V6 355 aaPredicted RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 CACTINQ8WUQ7 758 aaKnown RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 LSG1Q9H089 658 aaKnown RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 KIF2AO00139 706 aaPredicted RBP11.52□□□□□ -0.57
TCF4-208ENST00000543082 LIG1P18858 919 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 FBXO38Q6PIJ6 1188 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 TTC6Q86TZ1 520 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 CLSTN2Q9H4D0 955 aa11.52□□□□□ -0.57
TCF4-208ENST00000543082 TTC21AQ8NDW8 1320 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 LARGE1O95461 756 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
TCF4-208ENST00000543082 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
TCF4-208ENST00000543082 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
TCF4-208ENST00000543082 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
TCF4-208ENST00000543082 CAMK4Q16566 473 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 SCAND2PQ9GZW5 306 aaPredicted RBP11.5□□□□□ -0.57
TCF4-208ENST00000543082 NPHP3Q7Z494 1330 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 F6X3S4 739 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 PDCP20941 246 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 DSG3P32926 999 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 ELF2Q15723 593 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 NOL10Q9BSC4 688 aaKnown RBP11.5□□□□□ -0.57
TCF4-208ENST00000543082 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
TCF4-208ENST00000543082 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 CRB1P82279 1406 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
TCF4-208ENST00000543082 CAPN15O75808 1086 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 CYP2C19P33261 490 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 ZNF165P49910 485 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
TCF4-208ENST00000543082 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 U3KPZ7 1027 aaPredicted RBP11.49□□□□□ -0.57
TCF4-208ENST00000543082 C3P01024 1663 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 DIP2CQ9Y2E4 1556 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
TCF4-208ENST00000543082 TTC21BQ7Z4L5 1316 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 G2E3Q7L622 706 aa11.49□□□□□ -0.57
TCF4-208ENST00000543082 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
TCF4-208ENST00000543082 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 MCM10Q7L590 875 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 COG3Q96JB2 828 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 CYP46A1Q9Y6A2 500 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 ERBB3P21860 1342 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
TCF4-208ENST00000543082 NME9Q86XW9 330 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 SPATA32Q96LK8 384 aa11.48□□□□□ -0.57
TCF4-208ENST00000543082 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 DNAJC25Q9H1X3 360 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCF4-208ENST00000543082 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
TCF4-208ENST00000543082 MYH15Q9Y2K3 1946 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 SKILP12757 684 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 H2AFXP16104 143 aaPredicted RBP11.47□□□□□ -0.57
TCF4-208ENST00000543082 CAPN2P17655 700 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 RUFY2Q8WXA3 655 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 JAKMIP1Q96N16 626 aaKnown RBP11.47□□□□□ -0.57
TCF4-208ENST00000543082 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
TCF4-208ENST00000543082 ST3GAL1Q11201 340 aa11.46□□□□□ -0.57
TCF4-208ENST00000543082 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
TCF4-208ENST00000543082 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.57
TCF4-208ENST00000543082 CCAR2Q8N163 923 aaKnown RBP11.46□□□□□ -0.57
TCF4-208ENST00000543082 KCNB2Q92953 911 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms