RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
C2CD3-219ENST00000542930 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
C2CD3-219ENST00000542930 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 STARD3NLO95772 234 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
C2CD3-219ENST00000542930 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 MRC1P22897 1456 aa12.9□□□□□ -0.34
C2CD3-219ENST00000542930 NPHP1O15259 732 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
C2CD3-219ENST00000542930 MAP2K2P36507 400 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 ST5P78524 1137 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-219ENST00000542930 GPC2Q8N158 579 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 PDE4DIPQ5VU43 2346 aa12.89□□□□□ -0.35
C2CD3-219ENST00000542930 FZD9O00144 591 aa12.88□□□□□ -0.35
C2CD3-219ENST00000542930 CA12O43570 354 aa12.88□□□□□ -0.35
C2CD3-219ENST00000542930 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-219ENST00000542930 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
C2CD3-219ENST00000542930 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
C2CD3-219ENST00000542930 GRM1Q13255 1194 aa12.87□□□□□ -0.35
C2CD3-219ENST00000542930 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
C2CD3-219ENST00000542930 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
C2CD3-219ENST00000542930 SCN7AQ01118 1682 aa12.86□□□□□ -0.35
C2CD3-219ENST00000542930 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-219ENST00000542930 TLL2Q9Y6L7 1015 aa12.86□□□□□ -0.35
C2CD3-219ENST00000542930 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
C2CD3-219ENST00000542930 AOC2O75106 756 aa12.85□□□□□ -0.35
C2CD3-219ENST00000542930 NPR1P16066 1061 aa12.85□□□□□ -0.35
C2CD3-219ENST00000542930 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
C2CD3-219ENST00000542930 CST9Q5W186 159 aa12.85□□□□□ -0.35
C2CD3-219ENST00000542930 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
C2CD3-219ENST00000542930 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
C2CD3-219ENST00000542930 ZNF330Q9Y3S2 320 aaPredicted RBP12.85□□□□□ -0.35
C2CD3-219ENST00000542930 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-219ENST00000542930 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
C2CD3-219ENST00000542930 IL13P35225 146 aa12.84□□□□□ -0.35
C2CD3-219ENST00000542930 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
C2CD3-219ENST00000542930 DGKZQ13574 1117 aa12.84□□□□□ -0.35
C2CD3-219ENST00000542930 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
C2CD3-219ENST00000542930 LTBP1Q14766 1721 aa12.84□□□□□ -0.35
C2CD3-219ENST00000542930 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
C2CD3-219ENST00000542930 OLFM4Q6UX06 510 aa12.83□□□□□ -0.36
C2CD3-219ENST00000542930 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
C2CD3-219ENST00000542930 JDP2Q8WYK2 163 aa12.83□□□□□ -0.36
C2CD3-219ENST00000542930 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
C2CD3-219ENST00000542930 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-219ENST00000542930 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-219ENST00000542930 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-219ENST00000542930 ZNF496Q96IT1 587 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-219ENST00000542930 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
C2CD3-219ENST00000542930 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
C2CD3-219ENST00000542930 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 TRAF5O00463 557 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 EPS15P42566 896 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 SCNN1DP51172 638 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
C2CD3-219ENST00000542930 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 PSMD1Q99460 953 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 CASP8AP2Q9UKL3 1982 aa12.81□□□□□ -0.36
C2CD3-219ENST00000542930 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
C2CD3-219ENST00000542930 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
C2CD3-219ENST00000542930 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
C2CD3-219ENST00000542930 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
C2CD3-219ENST00000542930 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
C2CD3-219ENST00000542930 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
C2CD3-219ENST00000542930 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
C2CD3-219ENST00000542930 A1BGP04217 495 aa12.79□□□□□ -0.36
C2CD3-219ENST00000542930 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
C2CD3-219ENST00000542930 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
C2CD3-219ENST00000542930 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
C2CD3-219ENST00000542930 SNED1Q8TER0 1413 aa12.78□□□□□ -0.36
C2CD3-219ENST00000542930 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.37
C2CD3-219ENST00000542930 HMOX1P09601 288 aa12.77□□□□□ -0.37
C2CD3-219ENST00000542930 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
C2CD3-219ENST00000542930 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.37
C2CD3-219ENST00000542930 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
C2CD3-219ENST00000542930 PANK3Q9H999 370 aa12.77□□□□□ -0.37
C2CD3-219ENST00000542930 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
C2CD3-219ENST00000542930 SOX10P56693 466 aa12.76□□□□□ -0.37
C2CD3-219ENST00000542930 TEFQ10587 303 aa12.76□□□□□ -0.37
C2CD3-219ENST00000542930 NOGQ13253 232 aa12.76□□□□□ -0.37
C2CD3-219ENST00000542930 ADARB2Q9NS39 739 aaKnown RBP12.76□□□□□ -0.37
C2CD3-219ENST00000542930 RGL2O15211 777 aa12.75□□□□□ -0.37
C2CD3-219ENST00000542930 COL4A5P29400 1685 aa12.75□□□□□ -0.37
C2CD3-219ENST00000542930 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
C2CD3-219ENST00000542930 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
C2CD3-219ENST00000542930 IL17REQ8NFR9 667 aa12.74□□□□□ -0.37
C2CD3-219ENST00000542930 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
C2CD3-219ENST00000542930 PGAP2Q9UHJ9 254 aa12.74□□□□□ -0.37
C2CD3-219ENST00000542930 NIP7Q9Y221 180 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms