RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 KIF24Q5T7B8 1368 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 GOLGA6L6A8MZA4 724 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 GTF2F1P35269 517 aaKnown RBP eCLIP6.35□□□□□ -1.39
KDM3B-209ENST00000542866 UBE2HP62256 183 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 G2E3Q7L622 706 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 UNC5CLQ8IV45 518 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 IL1RAPL2Q9NP60 686 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 IFT172Q9UG01 1749 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 GNAI2P04899 355 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 ZSCAN22P10073 491 aaPredicted RBP6.35□□□□□ -1.39
KDM3B-209ENST00000542866 ANAPC15P60006 121 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 ATP7BP35670 1465 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 STX6O43752 255 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 CHRM1P11229 460 aaPredicted RBP6.35□□□□□ -1.39
KDM3B-209ENST00000542866 C1orf141Q5JVX7 400 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 NUTM1Q86Y26 1132 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 KIAA1524Q8TCG1 905 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 OSBPL3Q9H4L5 887 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 SPTLC3Q9NUV7 552 aa6.35□□□□□ -1.39
KDM3B-209ENST00000542866 MYO5BQ9ULV0 1848 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 C1orf167Q5SNV9 1468 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
KDM3B-209ENST00000542866 AP5Z1O43299 807 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 CPA1P15085 419 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 SYT1P21579 422 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 DNM1Q05193 864 aaKnown RBP6.34□□□□□ -1.39
KDM3B-209ENST00000542866 CAMK4Q16566 473 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 TEX2Q8IWB9 1127 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 KCNF1Q9H3M0 494 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 USP6P35125 1406 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 PTPRCP08575 1304 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 KIF20AO95235 890 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 PTGS1P23219 599 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 C16orf45Q96MC5 204 aaPredicted RBP6.34□□□□□ -1.39
KDM3B-209ENST00000542866 ATP6V1DQ9Y5K8 247 aa6.34□□□□□ -1.39
KDM3B-209ENST00000542866 PNMA6EA0A0J9YXQ4 647 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 F13A1P00488 732 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 AK2P54819 239 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CCDC83Q8IWF9 413 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 DDX54Q8TDD1 881 aaKnown RBP6.33□□□□□ -1.4
KDM3B-209ENST00000542866 ZNF592Q92610 1267 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 IL25Q9H293 177 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CD163L1Q9NR16 1453 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 KNDC1Q76NI1 1749 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CPS1P31327 1500 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 TPM3P06753 285 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CCDC192P0DO97 292 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CCT4P50991 539 aaKnown RBP6.33□□□□□ -1.4
KDM3B-209ENST00000542866 HSP90AB2PQ58FF8 381 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 C8orf37Q96NL8 207 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 TSPYL4Q9UJ04 414 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 MAP3K19Q56UN5 1328 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 RGS12O14924 1447 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 DCCP43146 1447 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CHL1O00533 1208 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 TATP17735 454 aaPredicted RBP6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CCDC186Q7Z3E2 898 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 STK31Q9BXU1 1019 aa6.33□□□□□ -1.4
KDM3B-209ENST00000542866 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 CGNQ9P2M7 1197 aaKnown RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 GOLGA6L4A6NEF3 574 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 GJB2P29033 226 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 HSPA4P34932 840 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 TEFQ10587 303 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 LRMPQ12912 555 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 NAA30Q147X3 362 aaPredicted RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 CWC27Q6UX04 472 aaKnown RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 FERMT3Q86UX7 667 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 LUZP1Q86V48 1076 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 TMEM87AQ8NBN3 555 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 ANKRD24Q8TF21 1146 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 SPATA31A3Q5VYP0 1347 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 FLT4P35916 1363 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 ARHGEF28Q8N1W1 1705 aaKnown RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 TNNT1P13805 278 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 CASTP20810 708 aaKnown RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 PLEKHO1Q53GL0 409 aaPredicted RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 SNX14Q9Y5W7 946 aa6.32□□□□□ -1.4
KDM3B-209ENST00000542866 LRRFIP2Q9Y608 721 aaKnown RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 ZNF142P52746 1687 aaPredicted RBP6.32□□□□□ -1.4
KDM3B-209ENST00000542866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
KDM3B-209ENST00000542866 SURF6O75683 361 aaKnown RBP6.31□□□□□ -1.4
KDM3B-209ENST00000542866 GNAI3P08754 354 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 ATP8B2P98198 1209 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 TPD52L1Q16890 204 aaPredicted RBP6.31□□□□□ -1.4
KDM3B-209ENST00000542866 RUFY3Q7L099 469 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 RASEFQ8IZ41 740 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 NRBP1Q9UHY1 535 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 LARGE1O95461 756 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 FAM173BQ6P4H8 233 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 USHBP1Q8N6Y0 703 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 ANKRD7Q92527 254 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 EIF4A2Q14240 407 aaKnown RBP6.31□□□□□ -1.4
KDM3B-209ENST00000542866 MAP3K11Q16584 847 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 NECAB1Q8N987 351 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms