RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, human

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX47-208	ENST00000542832	HYPK	Q9NX55	129 aa		11.26	□□□□□ -0.61
DDX47-208	ENST00000542832	FAM205C	A6NFA0	338 aa		11.25	□□□□□ -0.61
DDX47-208	ENST00000542832	BCAR3	O75815	825 aa		11.25	□□□□□ -0.61
DDX47-208	ENST00000542832	MICALL2	Q8IY33	904 aa		11.25	□□□□□ -0.61
DDX47-208	ENST00000542832	ZNF496	Q96IT1	587 aa	Predicted RBP	11.25	□□□□□ -0.61
DDX47-208	ENST00000542832	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
DDX47-208	ENST00000542832	ELL2	O00472	640 aa	Predicted RBP	11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	STARD3NL	O95772	234 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	HDGFL1	Q5TGJ6	251 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	KRT27	Q7Z3Y8	459 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	MS4A4A	Q96JQ5	239 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	ATG3	Q9NT62	314 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	CACNA1F	O60840	1977 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	KAT6B	Q8WYB5	2073 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	THSD7A	Q9UPZ6	1657 aa		11.24	□□□□□ -0.61
DDX47-208	ENST00000542832	MMRN1	Q13201	1228 aa		11.23	□□□□□ -0.61
DDX47-208	ENST00000542832	DZIP1L	Q8IYY4	767 aa	Known RBP	11.23	□□□□□ -0.61
DDX47-208	ENST00000542832	NOB1	Q9ULX3	412 aa	Known RBP	11.23	□□□□□ -0.61
DDX47-208	ENST00000542832	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX47-208	ENST00000542832	GLI3	P10071	1580 aa		11.23	□□□□□ -0.61
DDX47-208	ENST00000542832	SIPA1L3	O60292	1781 aa	Predicted RBP	11.23	□□□□□ -0.61
DDX47-208	ENST00000542832		A0A0G2JS52	829 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	KCNQ3	O43525	872 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	CANX	P27824	592 aa	Known RBP	11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	MYT1	Q01538	1121 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	SLC39A6	Q13433	755 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	DOK7	Q18PE1	504 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	WNK3	Q9BYP7	1800 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	HDAC5	Q9UQL6	1122 aa		11.22	□□□□□ -0.61
DDX47-208	ENST00000542832	KDM3B	Q7LBC6	1761 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	SHANK3	Q9BYB0	1731 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	RGL2	O15211	777 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	DDX58	O95786	925 aa	Known RBP	11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	HOXB1	P14653	301 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	ZNF710	Q8N1W2	664 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	ASAP1	Q9ULH1	1129 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	DDX19B	Q9UMR2	479 aa		11.21	□□□□□ -0.61
DDX47-208	ENST00000542832	TRIM27	P14373	513 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	FLII	Q13045	1269 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	KRT24	Q2M2I5	525 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	INTS3	Q68E01	1043 aa	Known RBP	11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	TMEM92	Q6UXU6	159 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	FTSJ3	Q8IY81	847 aa	Known RBP	11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	FRAT1	Q92837	279 aa	Predicted RBP	11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	SYTL4	Q96C24	671 aa	Predicted RBP	11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	KRTAP3-3	Q9BYR6	98 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	KRTAP3-2	Q9BYR7	98 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	RGS17	Q9UGC6	210 aa	Predicted RBP	11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	USP16	Q9Y5T5	823 aa		11.2	□□□□□ -0.62
DDX47-208	ENST00000542832	PLSCR1	O15162	318 aa		11.19	□□□□□ -0.62
DDX47-208	ENST00000542832	EIF2S2	P20042	333 aa	Known RBP	11.19	□□□□□ -0.62
DDX47-208	ENST00000542832	CCT4	P50991	539 aa	Known RBP	11.19	□□□□□ -0.62
DDX47-208	ENST00000542832	PDIA6	Q15084	440 aa		11.19	□□□□□ -0.62
DDX47-208	ENST00000542832	RC3H1	Q5TC82	1133 aa	Known RBP	11.19	□□□□□ -0.62
DDX47-208	ENST00000542832	LOC102724428	A0A0B4J2F2	783 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	PTCD1	O75127	700 aa	Known RBP	11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	SIK1	P57059	783 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	MVP	Q14764	893 aa	Known RBP	11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	SLC27A3	Q5K4L6	730 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	KSR2	Q6VAB6	950 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	PPP4R2	Q9NY27	417 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	TAOK2	Q9UL54	1235 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	GTF3C3	Q9Y5Q9	886 aa		11.18	□□□□□ -0.62
DDX47-208	ENST00000542832	ABCC4	O15439	1325 aa		11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	VIRMA	Q69YN4	1812 aa	Known RBP	11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	IL6ST	P40189	918 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	NPM2	Q86SE8	214 aa	Known RBP	11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	CCDC125	Q86Z20	511 aa		11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	CHPF2	Q9P2E5	772 aa		11.17	□□□□□ -0.62
DDX47-208	ENST00000542832	KCNQ2	O43526	872 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	PLIN1	O60240	522 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	CYP19A1	P11511	503 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	ATP6V1A	P38606	617 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	FKBP5	Q13451	457 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	POTEA	Q6S8J7	498 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	ANKRD13D	Q6ZTN6	518 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	LRP10	Q7Z4F1	713 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	ACSBG1	Q96GR2	724 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	BCL2L13	Q9BXK5	485 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	ZNF831	Q5JPB2	1677 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	PALLD	Q8WX93	1383 aa		11.16	□□□□□ -0.62
DDX47-208	ENST00000542832	KCP	Q6ZWJ8	1503 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	ERVV-1	B6SEH8	477 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	ZBTB7B	O15156	539 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	ALDH1L1	O75891	902 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	TRIM28	Q13263	835 aa	Known RBP	11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	PLBD2	Q8NHP8	589 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	DNAAF4	Q8WXU2	420 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	UBR2	Q8IWV8	1755 aa		11.15	□□□□□ -0.62
DDX47-208	ENST00000542832	ITGB4	P16144	1822 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	PAPPA	Q13219	1627 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832		A0A087WZG4	1122 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	RIMBP2	O15034	1052 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	GNAI3	P08754	354 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	NEXN	Q0ZGT2	675 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	LINS1	Q8NG48	757 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	ZBTB40	Q9NUA8	1239 aa		11.14	□□□□□ -0.63
DDX47-208	ENST00000542832	CNTNAP4	Q9C0A0	1308 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	PI4KAP2	A4QPH2	592 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms