RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SPATA31C1P0DKV0 1188 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 HIF1AQ16665 826 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 USP17L2Q6R6M4 530 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 USP17L1Q7RTZ2 530 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 LARGE2Q8N3Y3 721 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 ANKIB1Q9P2G1 1089 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 KLF15Q9UIH9 416 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 RBM19Q9Y4C8 960 aaKnown RBP5.47□□□□□ -1.53
KNTC1-213ENST00000542727 PALM3A6NDB9 673 aaPredicted RBP5.46□□□□□ -1.54
KNTC1-213ENST00000542727 ADARB2-AS1A8MUL3 147 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 ATP9BO43861 1147 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 PCBP4P57723 403 aaKnown RBP5.46□□□□□ -1.54
KNTC1-213ENST00000542727 CCDC102BQ68D86 513 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 POTEAQ6S8J7 498 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 SYT9Q86SS6 491 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 TPCN2Q8NHX9 752 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 RHPN1Q8TCX5 695 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 TNFRSF25Q93038 417 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 POM121Q96HA1 1249 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 HCN2Q9UL51 889 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 PARP3Q9Y6F1 533 aa5.46□□□□□ -1.54
KNTC1-213ENST00000542727 C1QTNF9BB2RNN3 333 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 LRRC69Q6ZNQ3 347 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 TNS4Q8IZW8 715 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 SIX5Q8N196 739 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 DEPDC4Q8N2C3 294 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 MDFIQ99750 246 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 EFCC1Q9HA90 598 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 STRN4Q9NRL3 753 aa5.45□□□□□ -1.54
KNTC1-213ENST00000542727 KCNQ4P56696 695 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 PRRT3Q5FWE3 981 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 CD163Q86VB7 1156 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 STAG2Q8N3U4 1231 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 GAS2L2Q8NHY3 880 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 C7orf43Q8WVR3 580 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 PRDM6Q9NQX0 595 aa5.44□□□□□ -1.54
KNTC1-213ENST00000542727 ZBTB7BO15156 539 aaPredicted RBP5.43□□□□□ -1.54
KNTC1-213ENST00000542727 CHRNA4P43681 627 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 CLDN10P78369 228 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 HDGFL1Q5TGJ6 251 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 OGFOD1Q8N543 542 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 ADAMTS19Q8TE59 1207 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 TRIM11Q96F44 468 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 UCN2Q96RP3 112 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 PLVAPQ9BX97 442 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 BRD7Q9NPI1 651 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 MKRN1Q9UHC7 482 aaKnown RBP5.43□□□□□ -1.54
KNTC1-213ENST00000542727 KIAA1024Q9UPX6 916 aa5.43□□□□□ -1.54
KNTC1-213ENST00000542727 POM121CA8CG34 1229 aa5.42□□□□□ -1.54
KNTC1-213ENST00000542727 SPEM2Q0P670 501 aa5.42□□□□□ -1.54
KNTC1-213ENST00000542727 TBCELQ5QJ74 424 aa5.42□□□□□ -1.54
KNTC1-213ENST00000542727 NACC1Q96RE7 527 aa5.42□□□□□ -1.54
KNTC1-213ENST00000542727 PHACTR1Q9C0D0 580 aa5.42□□□□□ -1.54
KNTC1-213ENST00000542727 TSPAN10Q9H1Z9 355 aaPredicted RBP5.42□□□□□ -1.54
KNTC1-213ENST00000542727 FURINP09958 794 aa5.41□□□□□ -1.54
KNTC1-213ENST00000542727 GATA4P43694 442 aa5.41□□□□□ -1.54
KNTC1-213ENST00000542727 CEP63Q96MT8 703 aa5.41□□□□□ -1.54
KNTC1-213ENST00000542727 KCNH4Q9UQ05 1017 aa5.41□□□□□ -1.54
KNTC1-213ENST00000542727 M0R082 166 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 PPP1R12BO60237 982 aaPredicted RBP5.4□□□□□ -1.54
KNTC1-213ENST00000542727 APBA3O96018 575 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 ADH7P40394 386 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 SEC13P55735 322 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 TYRO3Q06418 890 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 SFSWAPQ12872 951 aaKnown RBP5.4□□□□□ -1.54
KNTC1-213ENST00000542727 SH3PXD2AQ5TCZ1 1133 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 ZNF417Q8TAU3 575 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 SUSD3Q96L08 255 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 ZNF587Q96SQ5 575 aaPredicted RBP5.4□□□□□ -1.54
KNTC1-213ENST00000542727 SLC30A3Q99726 388 aa5.4□□□□□ -1.54
KNTC1-213ENST00000542727 IER5Q5VY09 327 aa5.39□□□□□ -1.55
KNTC1-213ENST00000542727 TSEN2Q8NCE0 465 aaKnown RBP5.39□□□□□ -1.55
KNTC1-213ENST00000542727 ZNF594Q96JF6 807 aaPredicted RBP5.39□□□□□ -1.55
KNTC1-213ENST00000542727 SFI1A8K8P3 1242 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 DKK1O94907 266 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 PRKCSHP14314 528 aaPredicted RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 RASA1P20936 1047 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 TRIM28Q13263 835 aaKnown RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 XP32Q5T750 250 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 LARP1Q6PKG0 1096 aaKnown RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 PROSER2Q86WR7 435 aaPredicted RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 ALDH16A1Q8IZ83 802 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 MICALL1Q8N3F8 863 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 GLMNQ92990 594 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 HSH2DQ96JZ2 352 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 C2orf49Q9BVC5 232 aaPredicted RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 HCN4Q9Y3Q4 1203 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 MAFBQ9Y5Q3 323 aaPredicted RBP5.38□□□□□ -1.55
KNTC1-213ENST00000542727 ATAD2Q6PL18 1390 aa5.38□□□□□ -1.55
KNTC1-213ENST00000542727 C21orf2O43822 256 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 LILRB5O75023 590 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 ALBP02768 609 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 NID1P14543 1247 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 EPB42P16452 691 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 RTN1Q16799 776 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 BTLAQ7Z6A9 289 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 FNBP4Q8N3X1 1017 aaPredicted RBP5.37□□□□□ -1.55
KNTC1-213ENST00000542727 STARD13Q9Y3M8 1113 aa5.37□□□□□ -1.55
KNTC1-213ENST00000542727 TGFBR3LH3BV60 316 aa5.36□□□□□ -1.55
KNTC1-213ENST00000542727 IGFBP4P22692 258 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms