RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
MRPL40P1-201ENST00000542687 ITGB4P16144 1822 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 ERVV-1B6SEH8 477 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 EZH2Q15910 746 aaKnown RBP10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 TRAPPC3LQ5T215 181 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 ADCY9O60503 1353 aa10.14□□□□□ -0.79
MRPL40P1-201ENST00000542687 MAP3K15Q6ZN16 1313 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 AAMPQ13685 434 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 BEND3Q5T5X7 828 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 LINS1Q8NG48 757 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 MYD88Q99836 296 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 UBR2Q8IWV8 1755 aa10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZPR1O75312 459 aa10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 ADRA2BP18089 450 aa10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 RFC4P35249 363 aa10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 TCIRG1Q13488 830 aa10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 TFCP2L1Q9NZI6 479 aa10.12□□□□□ -0.79
MRPL40P1-201ENST00000542687 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 PHF14O94880 888 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 GNAI3P08754 354 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 SSFA2P28290 1259 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 GIGYF2Q6Y7W6 1299 aaKnown RBP10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 STK32BQ9NY57 414 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 C9orf78Q9NZ63 289 aaPredicted RBP10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZNF652Q9Y2D9 606 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 BTAF1O14981 1849 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 COL15A1P39059 1388 aa10.11□□□□□ -0.79
MRPL40P1-201ENST00000542687 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 C5P01031 1676 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 NEURL1BA8MQ27 555 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 RGL2O15211 777 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 IGKV5-2P06315 115 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 HLFQ16534 295 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 CWF19L2Q2TBE0 894 aaKnown RBP10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 CLEC4GQ6UXB4 293 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 SMIM5Q71RC9 77 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 HDAC5Q9UQL6 1122 aa10.1□□□□□ -0.79
MRPL40P1-201ENST00000542687 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 MSH5O43196 834 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 TRIM28Q13263 835 aaKnown RBP10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 GCKRQ14397 625 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 CCDC191Q8NCU4 936 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 MEIS3Q99687 375 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 ISCA1Q9BUE6 129 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 USP44Q9H0E7 712 aa10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
MRPL40P1-201ENST00000542687 LRP5O75197 1615 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 SBF2Q86WG5 1849 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 GRM8O00222 908 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 GNAI2P04899 355 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 UBTFL1P0CB47 393 aaPredicted RBP10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 GPTP24298 496 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 SLC15A2Q16348 729 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 ZNF34Q8IZ26 560 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 ZNF831Q5JPB2 1677 aa10.08□□□□□ -0.8
MRPL40P1-201ENST00000542687 TJP1Q07157 1748 aa10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 LAMB4A4D0S4 1761 aa10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 PARP10Q53GL7 1025 aa10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 NIP7Q9Y221 180 aaKnown RBP eCLIP10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
MRPL40P1-201ENST00000542687 IBTKQ9P2D0 1353 aaPredicted RBP10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 H7C1W4 665 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 NBPF7P0C2Y1 421 aaPredicted RBP10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 BICDL1Q6ZP65 573 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 PPP1R42Q7Z4L9 355 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 NLRP10Q86W26 655 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 COL23A1Q86Y22 540 aaPredicted RBP10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 UTP14AQ9BVJ6 771 aaKnown RBP10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 TRMT112Q9UI30 125 aaKnown RBP10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 UTYO14607 1347 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 RREB1Q92766 1687 aa10.06□□□□□ -0.8
MRPL40P1-201ENST00000542687 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms