RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 HSPA4P34932 840 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 NUTM1Q86Y26 1132 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 LINS1Q8NG48 757 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 TMX3Q96JJ7 454 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 PALD1Q9ULE6 856 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 STRCP1A6NGW2 1772 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 TNS3Q68CZ2 1445 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 MEGF6O75095 1541 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 SGSM2O43147 1006 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 GLRX3O76003 335 aaKnown RBP7.96□□□□□ -1.14
PTPRO-208ENST00000542557 PROSER3Q2NL68 480 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 ZGPATQ8N5A5 531 aaKnown RBP7.96□□□□□ -1.14
PTPRO-208ENST00000542557 RAPGEF4Q8WZA2 1011 aa7.96□□□□□ -1.14
PTPRO-208ENST00000542557 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 C9orf78Q9NZ63 289 aaPredicted RBP7.95□□□□□ -1.14
PTPRO-208ENST00000542557 LAMB4A4D0S4 1761 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 IGSF3O75054 1194 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 ZNF790Q6PG37 636 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 CLASRPQ8N2M8 674 aaKnown RBP7.95□□□□□ -1.14
PTPRO-208ENST00000542557 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
PTPRO-208ENST00000542557 GRM8O00222 908 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 PHKG2P15735 406 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 TATP17735 454 aaPredicted RBP7.94□□□□□ -1.14
PTPRO-208ENST00000542557 ATF3P18847 181 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 PKP1Q13835 747 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 PDIA6Q15084 440 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 GPATCH3Q96I76 525 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 DDX49Q9Y6V7 483 aaKnown RBP7.94□□□□□ -1.14
PTPRO-208ENST00000542557 GLI3P10071 1580 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 CPDO75976 1380 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
PTPRO-208ENST00000542557 IL25Q9H293 177 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 LMBRD1Q9NUN5 540 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 ZDHHC9Q9Y397 364 aa7.94□□□□□ -1.14
PTPRO-208ENST00000542557 COL15A1P39059 1388 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 PRAMEF22A3QJZ6 481 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 BRD1O95696 1058 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 ZC3H6P61129 1189 aaKnown RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 OS9Q13438 667 aaPredicted RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 MCTP1Q6DN14 999 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 IFNL2Q8IZJ0 200 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 PANK2Q9BZ23 570 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 LSG1Q9H089 658 aaKnown RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 ECHDC1Q9NTX5 307 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 BRD2P25440 801 aaKnown RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 ZNF445P59923 1031 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 CWF19L2Q2TBE0 894 aaKnown RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 LARP1Q6PKG0 1096 aaKnown RBP7.93□□□□□ -1.14
PTPRO-208ENST00000542557 RUFY2Q8WXA3 655 aa7.93□□□□□ -1.14
PTPRO-208ENST00000542557 GAS2L3Q86XJ1 694 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 KAZALD1Q96I82 304 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 SUCLG2Q96I99 432 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 NLRP2Q9NX02 1062 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 ARFGEF2Q9Y6D5 1785 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 IGKV5-2P06315 115 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 IFIT2P09913 472 aaKnown RBP7.92□□□□□ -1.14
PTPRO-208ENST00000542557 NEXNQ0ZGT2 675 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 SNX14Q9Y5W7 946 aa7.92□□□□□ -1.14
PTPRO-208ENST00000542557 NEURL1BA8MQ27 555 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 HIP1O00291 1037 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 MAP4K4O95819 1239 aaPredicted RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 KIAA1211Q6ZU35 1233 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 LRP10Q7Z4F1 713 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 KCNB2Q92953 911 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 EVI5LQ96CN4 794 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 TTC14Q96N46 770 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 METTL22Q9BUU2 404 aaPredicted RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 BICC1Q9H694 974 aaKnown RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 DIAPH3Q9NSV4 1193 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 SPATA31A3Q5VYP0 1347 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 SNRPA1P09661 255 aaKnown RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 UPF3BQ9BZI7 483 aaKnown RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 SNRKQ9NRH2 765 aa7.91□□□□□ -1.14
PTPRO-208ENST00000542557 PA2G4Q9UQ80 394 aaKnown RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 AFDNP55196 1824 aaKnown RBP7.91□□□□□ -1.14
PTPRO-208ENST00000542557 PAPPAQ13219 1627 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 UBR2Q8IWV8 1755 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 SASH1O94885 1247 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 MBD3O95983 291 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 G3BP1Q13283 466 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTPRO-208ENST00000542557 SLC39A6Q13433 755 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 GCKRQ14397 625 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
PTPRO-208ENST00000542557 AACSQ86V21 672 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
PTPRO-208ENST00000542557 XIRP1Q702N8 1843 aaKnown RBP7.9□□□□□ -1.14
PTPRO-208ENST00000542557 ZSCAN23Q3MJ62 389 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 NFATC2IPQ8NCF5 419 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 XAGE3Q8WTP9 111 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 ZNF496Q96IT1 587 aaPredicted RBP7.9□□□□□ -1.15
PTPRO-208ENST00000542557 FMNL2Q96PY5 1086 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 TM6SF1Q9BZW5 370 aa7.9□□□□□ -1.15
PTPRO-208ENST00000542557 CYP27B1O15528 508 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms