RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 CHPF2Q9P2E5 772 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 CYP46A1Q9Y6A2 500 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 LMO7Q8WWI1 1683 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 RPAP1Q9BWH6 1393 aaPredicted RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 BTBD11A6QL63 1104 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 PDCP20941 246 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 USP48Q86UV5 1035 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 PDCL3Q9H2J4 239 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 NFAT5O94916 1531 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 TPM3P06753 285 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 ANKRD1Q15327 319 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 HYPKQ9NX55 129 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 FER1L4A9Z1Z3 1794 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 F13A1P00488 732 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 KCNA6P17658 529 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 AK2P54819 239 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 LTN1O94822 1766 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 NBPF7P0C2Y1 421 aaPredicted RBP8.13□□□□□ -1.11
NKRF-204ENST00000542113 NUTM2GQ5VZR2 741 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 CWC27Q6UX04 472 aaKnown RBP8.13□□□□□ -1.11
NKRF-204ENST00000542113 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 KCNB2Q92953 911 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
NKRF-204ENST00000542113 CASTP20810 708 aaKnown RBP8.12□□□□□ -1.11
NKRF-204ENST00000542113 CEBPAP49715 358 aaPredicted RBP8.12□□□□□ -1.11
NKRF-204ENST00000542113 RNF214Q8ND24 703 aa8.12□□□□□ -1.11
NKRF-204ENST00000542113 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
NKRF-204ENST00000542113 SYT1P21579 422 aa8.12□□□□□ -1.11
NKRF-204ENST00000542113 KCNJ4P48050 445 aa8.12□□□□□ -1.11
NKRF-204ENST00000542113 ADCY9O60503 1353 aa8.12□□□□□ -1.11
NKRF-204ENST00000542113 G3BP1Q13283 466 aaKnown RBP eCLIP8.11□□□□□ -1.11
NKRF-204ENST00000542113 SASS6Q6UVJ0 657 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 LINS1Q8NG48 757 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 CCDC171Q6TFL3 1326 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 DYNC1I1O14576 645 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 RUFY3Q7L099 469 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 JAKMIP1Q96N16 626 aaKnown RBP8.11□□□□□ -1.11
NKRF-204ENST00000542113 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 R3HCC1Q9Y3T6 440 aaKnown RBP8.11□□□□□ -1.11
NKRF-204ENST00000542113 GOLGA6L6A8MZA4 724 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
NKRF-204ENST00000542113 MAP4K4O95819 1239 aaPredicted RBP8.11□□□□□ -1.11
NKRF-204ENST00000542113 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
NKRF-204ENST00000542113 PSME1Q06323 249 aa8.11□□□□□ -1.11
NKRF-204ENST00000542113 MAP3K2Q9Y2U5 619 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 UTYO14607 1347 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 GRM8O00222 908 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 GJB2P29033 226 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 KRT85P78386 507 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 NEXNQ0ZGT2 675 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 KRT32Q14532 448 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 AACSQ86V21 672 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 IL25Q9H293 177 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 ALDH8A1Q9H2A2 487 aaPredicted RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 CNPY2Q9Y2B0 182 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 GADD45BO75293 160 aaPredicted RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.1□□□□□ -1.11
NKRF-204ENST00000542113 RFX7Q2KHR2 1363 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 HEG1Q9ULI3 1381 aa8.1□□□□□ -1.11
NKRF-204ENST00000542113 CHD2O14647 1828 aaKnown RBP8.09□□□□□ -1.11
NKRF-204ENST00000542113 FIBPO43427 364 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 ELP1O95163 1332 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 CCDC192P0DO97 292 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 LARP1Q6PKG0 1096 aaKnown RBP8.09□□□□□ -1.11
NKRF-204ENST00000542113 CCDC83Q8IWF9 413 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 PRIMPOLQ96LW4 560 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 GDPD2Q9HCC8 539 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
NKRF-204ENST00000542113 UQCRHLA0A096LP55 91 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 UQCRHP07919 91 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 NECTIN1Q15223 517 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 MTMR6Q9Y217 621 aa8.09□□□□□ -1.11
NKRF-204ENST00000542113 SLIT3O75094 1523 aa8.09□□□□□ -1.12
NKRF-204ENST00000542113 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 BLOC1S2Q6QNY1 142 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 PIBF1Q8WXW3 757 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 MAP4K1Q92918 833 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 CHAMP1Q96JM3 812 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 SCAND2PQ9GZW5 306 aaPredicted RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 RBM8AQ9Y5S9 174 aaKnown RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 CREB3L3Q68CJ9 461 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 TICAM2Q86XR7 235 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms