RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 C7orf43Q8WVR3 580 aa25.48■■□□□ 1.67
RAP1B-227ENST00000542018 SETDB2Q96T68 719 aa25.48■■□□□ 1.67
RAP1B-227ENST00000542018 MKRN1Q9UHC7 482 aaKnown RBP25.48■■□□□ 1.67
RAP1B-227ENST00000542018 GAS2L2Q8NHY3 880 aa25.47■■□□□ 1.67
RAP1B-227ENST00000542018 CNKSR1Q969H4 720 aa25.47■■□□□ 1.67
RAP1B-227ENST00000542018 FMNL2Q96PY5 1086 aa25.47■■□□□ 1.67
RAP1B-227ENST00000542018 PIP4K2AP48426 406 aaPredicted RBP25.46■■□□□ 1.67
RAP1B-227ENST00000542018 PASKQ96RG2 1323 aa25.45■■□□□ 1.66
RAP1B-227ENST00000542018 U2SURPO15042 1029 aaKnown RBP25.45■■□□□ 1.66
RAP1B-227ENST00000542018 MASTLQ96GX5 879 aa25.45■■□□□ 1.66
RAP1B-227ENST00000542018 PHACTR3Q96KR7 559 aa25.45■■□□□ 1.66
RAP1B-227ENST00000542018 USP16Q9Y5T5 823 aa25.45■■□□□ 1.66
RAP1B-227ENST00000542018 SCN4AP35499 1836 aa25.44■■□□□ 1.66
RAP1B-227ENST00000542018 PRAMEF22A3QJZ6 481 aa25.44■■□□□ 1.66
RAP1B-227ENST00000542018 DZIP3Q86Y13 1208 aaKnown RBP25.44■■□□□ 1.66
RAP1B-227ENST00000542018 L3MBTL3Q96JM7 780 aaPredicted RBP25.43■■□□□ 1.66
RAP1B-227ENST00000542018 CNTNAP1P78357 1384 aa25.43■■□□□ 1.66
RAP1B-227ENST00000542018 ST5P78524 1137 aa25.42■■□□□ 1.66
RAP1B-227ENST00000542018 TAF1DQ9H5J8 278 aaPredicted RBP25.41■■□□□ 1.66
RAP1B-227ENST00000542018 NPC1L1Q9UHC9 1359 aa25.41■■□□□ 1.66
RAP1B-227ENST00000542018 BTBD11A6QL63 1104 aa25.4■■□□□ 1.66
RAP1B-227ENST00000542018 FOXN1O15353 648 aa25.4■■□□□ 1.66
RAP1B-227ENST00000542018 SOGA3Q5TF21 947 aa25.4■■□□□ 1.66
RAP1B-227ENST00000542018 OLFM4Q6UX06 510 aa25.4■■□□□ 1.66
RAP1B-227ENST00000542018 ADAMTSL1Q8N6G6 1762 aa25.4■■□□□ 1.66
RAP1B-227ENST00000542018 ZNF541Q9H0D2 1346 aa25.39■■□□□ 1.66
RAP1B-227ENST00000542018 KLRG2A4D1S0 409 aaPredicted RBP25.39■■□□□ 1.66
RAP1B-227ENST00000542018 ITGBL1O95965 494 aaPredicted RBP25.39■■□□□ 1.66
RAP1B-227ENST00000542018 LDHDQ86WU2 507 aa25.39■■□□□ 1.66
RAP1B-227ENST00000542018 NPHP1O15259 732 aa25.38■■□□□ 1.65
RAP1B-227ENST00000542018 CLEC4GQ6UXB4 293 aa25.38■■□□□ 1.65
RAP1B-227ENST00000542018 RSPH6AQ9H0K4 717 aa25.38■■□□□ 1.65
RAP1B-227ENST00000542018 NBPF26B4DH59 902 aa25.37■■□□□ 1.65
RAP1B-227ENST00000542018 PRKAR2BP31323 418 aa25.37■■□□□ 1.65
RAP1B-227ENST00000542018 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
RAP1B-227ENST00000542018 NBPF10Q6P3W6 841 aaKnown RBP25.37■■□□□ 1.65
RAP1B-227ENST00000542018 NBPF5PQ86XG9 351 aaPredicted RBP25.37■■□□□ 1.65
RAP1B-227ENST00000542018 NBPF15Q8N660 670 aa25.37■■□□□ 1.65
RAP1B-227ENST00000542018 IQCA1LA6NCM1 817 aa25.36■■□□□ 1.65
RAP1B-227ENST00000542018 CCDC93Q567U6 631 aa25.36■■□□□ 1.65
RAP1B-227ENST00000542018 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
RAP1B-227ENST00000542018 NPR1P16066 1061 aa25.35■■□□□ 1.65
RAP1B-227ENST00000542018 FKBP4Q02790 459 aaKnown RBP eCLIP25.35■■□□□ 1.65
RAP1B-227ENST00000542018 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
RAP1B-227ENST00000542018 VEGFBP49765 207 aa25.34■■□□□ 1.65
RAP1B-227ENST00000542018 SNED1Q8TER0 1413 aa25.34■■□□□ 1.65
RAP1B-227ENST00000542018 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
RAP1B-227ENST00000542018 SNRPA1P09661 255 aaKnown RBP25.32■■□□□ 1.64
RAP1B-227ENST00000542018 MCM10Q7L590 875 aa25.32■■□□□ 1.64
RAP1B-227ENST00000542018 TMEM88BA6NKF7 163 aa25.31■■□□□ 1.64
RAP1B-227ENST00000542018 PRDM10Q9NQV6 1147 aa25.31■■□□□ 1.64
RAP1B-227ENST00000542018 NIP7Q9Y221 180 aaKnown RBP eCLIP25.31■■□□□ 1.64
RAP1B-227ENST00000542018 COL4A5P29400 1685 aa25.3■■□□□ 1.64
RAP1B-227ENST00000542018 HLFQ16534 295 aa25.3■■□□□ 1.64
RAP1B-227ENST00000542018 EAPPQ56P03 285 aaPredicted RBP25.3■■□□□ 1.64
RAP1B-227ENST00000542018 HACL1Q9UJ83 578 aa25.3■■□□□ 1.64
RAP1B-227ENST00000542018 ZNF652Q9Y2D9 606 aa25.3■■□□□ 1.64
RAP1B-227ENST00000542018 FZD9O00144 591 aa25.29■■□□□ 1.64
RAP1B-227ENST00000542018 TPTE2Q6XPS3 522 aa25.29■■□□□ 1.64
RAP1B-227ENST00000542018 FAM177BA6PVY3 158 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 RGL2O15211 777 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 EPHX2P34913 555 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 WBP1LQ9NX94 342 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 RNF123Q5XPI4 1314 aa25.28■■□□□ 1.64
RAP1B-227ENST00000542018 LTBP1Q14766 1721 aa25.27■■□□□ 1.64
RAP1B-227ENST00000542018 IARSP41252 1262 aaKnown RBP25.27■■□□□ 1.64
RAP1B-227ENST00000542018 RTKN2Q8IZC4 609 aa25.27■■□□□ 1.64
RAP1B-227ENST00000542018 SYNE4Q8N205 404 aa25.27■■□□□ 1.64
RAP1B-227ENST00000542018 CTCFP49711 727 aaPredicted RBP25.26■■□□□ 1.63
RAP1B-227ENST00000542018 MAP1SQ66K74 1059 aaPredicted RBP25.25■■□□□ 1.63
RAP1B-227ENST00000542018 CNTROBQ8N137 903 aa25.25■■□□□ 1.63
RAP1B-227ENST00000542018 ABCC12Q96J65 1359 aa25.25■■□□□ 1.63
RAP1B-227ENST00000542018 LAMB4A4D0S4 1761 aa25.24■■□□□ 1.63
RAP1B-227ENST00000542018 RASSF10A6NK89 507 aa25.24■■□□□ 1.63
RAP1B-227ENST00000542018 CRY2Q49AN0 593 aa25.24■■□□□ 1.63
RAP1B-227ENST00000542018 SLC51AQ86UW1 340 aa25.24■■□□□ 1.63
RAP1B-227ENST00000542018 CLEC11AQ9Y240 323 aa25.24■■□□□ 1.63
RAP1B-227ENST00000542018 NUP98P52948 1817 aa25.23■■□□□ 1.63
RAP1B-227ENST00000542018 LBX1P52954 281 aa25.23■■□□□ 1.63
RAP1B-227ENST00000542018 ALDH1B1P30837 517 aa25.22■■□□□ 1.63
RAP1B-227ENST00000542018 PNMA8AQ86V59 439 aaPredicted RBP25.22■■□□□ 1.63
RAP1B-227ENST00000542018 GPC2Q8N158 579 aa25.22■■□□□ 1.63
RAP1B-227ENST00000542018 PSMD1Q99460 953 aa25.22■■□□□ 1.63
RAP1B-227ENST00000542018 RTF1Q92541 710 aaKnown RBP25.21■■□□□ 1.63
RAP1B-227ENST00000542018 AIDAQ96BJ3 306 aa25.21■■□□□ 1.63
RAP1B-227ENST00000542018 MIS18AQ9NYP9 233 aa25.21■■□□□ 1.63
RAP1B-227ENST00000542018 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
RAP1B-227ENST00000542018 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
RAP1B-227ENST00000542018 DEFB115Q30KQ5 88 aa25.2■■□□□ 1.62
RAP1B-227ENST00000542018 NUTM1Q86Y26 1132 aa25.2■■□□□ 1.62
RAP1B-227ENST00000542018 CFAP53Q96M91 514 aa25.2■■□□□ 1.62
RAP1B-227ENST00000542018 KDM3BQ7LBC6 1761 aa25.19■■□□□ 1.62
RAP1B-227ENST00000542018 HSPA8P11142 646 aaKnown RBP25.19■■□□□ 1.62
RAP1B-227ENST00000542018 FMR1Q06787 632 aaKnown RBP eCLIP25.19■■□□□ 1.62
RAP1B-227ENST00000542018 DLG5Q8TDM6 1919 aa25.18■■□□□ 1.62
RAP1B-227ENST00000542018 HTATSF1O43719 755 aaKnown RBP25.18■■□□□ 1.62
RAP1B-227ENST00000542018 TAF7Q15545 349 aaPredicted RBP25.18■■□□□ 1.62
RAP1B-227ENST00000542018 NUDCQ9Y266 331 aa25.18■■□□□ 1.62
RAP1B-227ENST00000542018 WDR33Q9C0J8 1336 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms