RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IPO5O00410 1097 aaKnown RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 RLBP1P12271 317 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 PECAM1P16284 738 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 NF2P35240 595 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 ACTN2P35609 894 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 DDIT3P35638 169 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 RPS6KA3P51812 740 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 MNAT1P51948 309 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 CORO7P57737 925 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 NEXNQ0ZGT2 675 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 GRIK3Q13003 919 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TAF7Q15545 349 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 DBN1Q16643 649 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 PUS10Q3MIT2 529 aaKnown RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 IFFO2Q5TF58 517 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 ZKSCAN2Q63HK3 967 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TAX1BP1Q86VP1 789 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 NCAPG2Q86XI2 1143 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 ANKRD13AQ8IZ07 590 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TDRD7Q8NHU6 1098 aaKnown RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 HDAC7Q8WUI4 952 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 ERO1AQ96HE7 468 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC34Q96HJ3 373 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC85AQ96PX6 553 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 THUMPD2Q9BTF0 503 aaKnown RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 STK31Q9BXU1 1019 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TRIM7Q9C029 511 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 TMX1Q9H3N1 280 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 BATF3Q9NR55 127 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 CLIP2Q9UDT6 1046 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 ITGB1BP2Q9UKP3 347 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 MYO6Q9UM54 1294 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 PLEKHH2Q8IVE3 1493 aa6.09□□□□□ -1.44
SNHG1-218ENST00000541615 VIRMAQ69YN4 1812 aaKnown RBP6.09□□□□□ -1.44
SNHG1-218ENST00000541615 CADPSQ9ULU8 1353 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 SPAG9O60271 1321 aaKnown RBP6.08□□□□□ -1.44
SNHG1-218ENST00000541615 TPD52L2O43399 206 aaKnown RBP6.08□□□□□ -1.44
SNHG1-218ENST00000541615 FAM200BP0CF97 657 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 MYBL2P10244 700 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 ELF1P32519 619 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 CDR1P51861 262 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 EIF4G2P78344 907 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNHG1-218ENST00000541615 DDR1Q08345 913 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 OTUD6AQ7L8S5 288 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 PIK3R5Q8WYR1 880 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 ZBED2Q9BTP6 218 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 RMI1Q9H9A7 625 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 ZNF446Q9NWS9 450 aa6.08□□□□□ -1.44
SNHG1-218ENST00000541615 ELP1O95163 1332 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 GTPBP6O43824 516 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 EVI5O60447 810 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 SASH1O94885 1247 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC175P0C221 793 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 VCAM1P19320 739 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 YY1P25490 414 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 MRPL12P52815 198 aaKnown RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 MFSD10Q14728 455 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 SART3Q15020 963 aaKnown RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 ZSCAN23Q3MJ62 389 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 ACBD5Q5T8D3 534 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC73Q6ZRK6 1079 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 PACS2Q86VP3 889 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 ANKRD13BQ86YJ7 626 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC50Q8IVM0 306 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 APLFQ8IW19 511 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 SMCR8Q8TEV9 937 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 ZDHHC16Q969W1 377 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC102AQ96A19 550 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 DTNBP1Q96EV8 351 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 DDX27Q96GQ7 796 aaKnown RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 TRPV5Q9NQA5 729 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.442e-26■□□□□ 8.9
SNHG1-218ENST00000541615 MAP3K1Q13233 1512 aa6.07□□□□□ -1.44
SNHG1-218ENST00000541615 POLA1P09884 1462 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-218ENST00000541615 ATAD2Q6PL18 1390 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 CCNB3Q8WWL7 1395 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 EIF3CLB5ME19 914 aaKnown RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 HMMRO75330 724 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 RGS20O76081 388 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 RBM5P52756 815 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 GYS2P54840 703 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 SLC8A3P57103 927 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 DEUP1Q05D60 604 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 TBC1D10BQ4KMP7 808 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 CCDC178Q5BJE1 867 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 HHATQ5VTY9 493 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 DNAJC14Q6Y2X3 702 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 THSD4Q6ZMP0 1018 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 NFXL1Q6ZNB6 911 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 MICALCLQ6ZW33 695 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 GET4Q7L5D6 327 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 APBB1IPQ7Z5R6 666 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-218ENST00000541615 WDR63Q8IWG1 891 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 ATL2Q8NHH9 583 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 KIAA1524Q8TCG1 905 aa6.06□□□□□ -1.44
SNHG1-218ENST00000541615 BICD2Q8TD16 824 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms