RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 PRDM11Q9NQV5 511 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 STAP2Q9UGK3 403 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 JCADQ9P266 1359 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 CPDO75976 1380 aa12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
PHACTR3-209ENST00000541461 HSPA4P34932 840 aa12.71□□□□□ -0.37
PHACTR3-209ENST00000541461 SRCIN1Q9C0H9 1055 aa12.71□□□□□ -0.37
PHACTR3-209ENST00000541461 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
PHACTR3-209ENST00000541461 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.38
PHACTR3-209ENST00000541461 PDE4CQ08493 712 aa12.71□□□□□ -0.38
PHACTR3-209ENST00000541461 IL17RAQ96F46 866 aa12.71□□□□□ -0.38
PHACTR3-209ENST00000541461 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
PHACTR3-209ENST00000541461 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
PHACTR3-209ENST00000541461 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
PHACTR3-209ENST00000541461 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
PHACTR3-209ENST00000541461 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
PHACTR3-209ENST00000541461 COL18A1P39060 1754 aa12.69□□□□□ -0.38
PHACTR3-209ENST00000541461 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
PHACTR3-209ENST00000541461 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
PHACTR3-209ENST00000541461 ERBB3P21860 1342 aa12.69□□□□□ -0.38
PHACTR3-209ENST00000541461 DTNBO60941 627 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 PHF14O94880 888 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 ARID3AQ99856 593 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 FAM208AQ9UK61 1670 aaKnown RBP12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 CAMTA1Q9Y6Y1 1673 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 KDRP35968 1356 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 AOX1Q06278 1338 aa12.68□□□□□ -0.38
PHACTR3-209ENST00000541461 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 PPP1R42Q7Z4L9 355 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 CPA1P15085 419 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 AK2P54819 239 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
PHACTR3-209ENST00000541461 SGSM2O43147 1006 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 TTC14Q96N46 770 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 RAD50Q92878 1312 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 ADCY5O95622 1261 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 SYT1P21579 422 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 UVSSAQ2YD98 709 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 DNTTIP2Q5QJE6 756 aaKnown RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 C17orf53Q8N3J3 647 aaPredicted RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
PHACTR3-209ENST00000541461 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 STX6O43752 255 aa12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 TTC12Q9H892 705 aaPredicted RBP12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
PHACTR3-209ENST00000541461 FIBPO43427 364 aa12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 RAB11FIP3O75154 756 aa12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 EVA1CP58658 441 aa12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.39
PHACTR3-209ENST00000541461 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 LARGE1O95461 756 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 POLA2Q14181 598 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 C8orf37Q96NL8 207 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
PHACTR3-209ENST00000541461 F13A1P00488 732 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 NBPF7P0C2Y1 421 aaPredicted RBP12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 UBE2HP62256 183 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
PHACTR3-209ENST00000541461 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms