RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HDAC1Q13547 482 aaPredicted RBP12.91□□□□□ -0.34
CHFR-219ENST00000541341 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 SNX21Q969T3 373 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
CHFR-219ENST00000541341 IL16Q14005 1332 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 TERF1P54274 439 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 ZKSCAN2Q63HK3 967 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
CHFR-219ENST00000541341 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
CHFR-219ENST00000541341 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
CHFR-219ENST00000541341 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
CHFR-219ENST00000541341 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
CHFR-219ENST00000541341 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
CHFR-219ENST00000541341 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
CHFR-219ENST00000541341 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 IGHDP01880 384 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 CHRNA5P30532 468 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
CHFR-219ENST00000541341 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 C22orf23Q9BZE7 217 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
CHFR-219ENST00000541341 DLEC1Q9Y238 1755 aa12.88□□□□□ -0.35
CHFR-219ENST00000541341 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
CHFR-219ENST00000541341 TRAK2O60296 914 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 BCAR3O75815 825 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 HMOX1P09601 288 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
CHFR-219ENST00000541341 TGFB2P61812 414 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHFR-219ENST00000541341 DDR1Q08345 913 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
CHFR-219ENST00000541341 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 MAP7D2Q96T17 732 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
CHFR-219ENST00000541341 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
CHFR-219ENST00000541341 KCNA3P22001 575 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 HTRA3P83110 453 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 SLC39A6Q13433 755 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
CHFR-219ENST00000541341 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 LGR6Q9HBX8 967 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.86□□□□□ -0.35
CHFR-219ENST00000541341 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
CHFR-219ENST00000541341 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 ADRA2BP18089 450 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 HSP90AA2PQ14568 343 aaPredicted RBP12.85□□□□□ -0.35
CHFR-219ENST00000541341 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
CHFR-219ENST00000541341 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
CHFR-219ENST00000541341 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
CHFR-219ENST00000541341 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
CHFR-219ENST00000541341 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
CHFR-219ENST00000541341 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
CHFR-219ENST00000541341 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
CHFR-219ENST00000541341 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
CHFR-219ENST00000541341 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
CHFR-219ENST00000541341 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHFR-219ENST00000541341 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
CHFR-219ENST00000541341 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
CHFR-219ENST00000541341 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
CHFR-219ENST00000541341 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
CHFR-219ENST00000541341 RASSF7Q02833 373 aa12.82□□□□□ -0.36
CHFR-219ENST00000541341 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
CHFR-219ENST00000541341 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
CHFR-219ENST00000541341 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
CHFR-219ENST00000541341 ESPNB1AK53 854 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
CHFR-219ENST00000541341 ZPR1O75312 459 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 TOMM70O94826 608 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 CLEC17AQ6ZS10 378 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
CHFR-219ENST00000541341 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
CHFR-219ENST00000541341 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
CHFR-219ENST00000541341 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
CHFR-219ENST00000541341 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
CHFR-219ENST00000541341 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
CHFR-219ENST00000541341 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
CHFR-219ENST00000541341 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
CHFR-219ENST00000541341 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms