RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
LMO3-224ENST00000540848 PRSS12P56730 875 aa12.76□□□□□ -0.37
LMO3-224ENST00000540848 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
LMO3-224ENST00000540848 MCM10Q7L590 875 aa12.76□□□□□ -0.37
LMO3-224ENST00000540848 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
LMO3-224ENST00000540848 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
LMO3-224ENST00000540848 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
LMO3-224ENST00000540848 USP19O94966 1318 aa12.75□□□□□ -0.37
LMO3-224ENST00000540848 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
LMO3-224ENST00000540848 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
LMO3-224ENST00000540848 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
LMO3-224ENST00000540848 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
LMO3-224ENST00000540848 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
LMO3-224ENST00000540848 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
LMO3-224ENST00000540848 C1orf167Q5SNV9 1468 aa12.74□□□□□ -0.37
LMO3-224ENST00000540848 LMTK3Q96Q04 1460 aa12.74□□□□□ -0.37
LMO3-224ENST00000540848 SMAPO00193 183 aa12.74□□□□□ -0.37
LMO3-224ENST00000540848 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
LMO3-224ENST00000540848 ELL2O00472 640 aaPredicted RBP12.73□□□□□ -0.37
LMO3-224ENST00000540848 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
LMO3-224ENST00000540848 NUCB1Q02818 461 aa12.73□□□□□ -0.37
LMO3-224ENST00000540848 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
LMO3-224ENST00000540848 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
LMO3-224ENST00000540848 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
LMO3-224ENST00000540848 ABCC6O95255 1503 aa12.72□□□□□ -0.37
LMO3-224ENST00000540848 MLLT3P42568 568 aaPredicted RBP12.72□□□□□ -0.37
LMO3-224ENST00000540848 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
LMO3-224ENST00000540848 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
LMO3-224ENST00000540848 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
LMO3-224ENST00000540848 MED1Q15648 1581 aaPredicted RBP12.71□□□□□ -0.37
LMO3-224ENST00000540848 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
LMO3-224ENST00000540848 RGS12O14924 1447 aa12.71□□□□□ -0.37
LMO3-224ENST00000540848 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
LMO3-224ENST00000540848 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
LMO3-224ENST00000540848 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
LMO3-224ENST00000540848 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
LMO3-224ENST00000540848 MSH6P52701 1360 aa12.71□□□□□ -0.38
LMO3-224ENST00000540848 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.38
LMO3-224ENST00000540848 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.38
LMO3-224ENST00000540848 GCP02774 474 aa12.7□□□□□ -0.38
LMO3-224ENST00000540848 ATF3P18847 181 aa12.7□□□□□ -0.38
LMO3-224ENST00000540848 CCDC30Q5VVM6 783 aa12.7□□□□□ -0.38
LMO3-224ENST00000540848 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
LMO3-224ENST00000540848 FAM208AQ9UK61 1670 aaKnown RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 FOXO3O43524 673 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 HOXB7P09629 217 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 RPAP2Q8IXW5 612 aaPredicted RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 ORAI2Q96SN7 254 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 PXDNLA1KZ92 1463 aa12.69□□□□□ -0.38
LMO3-224ENST00000540848 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
LMO3-224ENST00000540848 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
LMO3-224ENST00000540848 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
LMO3-224ENST00000540848 LTV1Q96GA3 475 aaPredicted RBP12.68□□□□□ -0.38
LMO3-224ENST00000540848 TMEM94Q12767 1356 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 A0A0G2JS52 829 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 BECN1Q14457 450 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 TTC13Q8NBP0 860 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 TATDN2Q93075 761 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
LMO3-224ENST00000540848 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
LMO3-224ENST00000540848 BMP2KLQ5H9B9 411 aa12.66□□□□□ -0.38
LMO3-224ENST00000540848 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
LMO3-224ENST00000540848 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
LMO3-224ENST00000540848 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
LMO3-224ENST00000540848 HMMRO75330 724 aa12.65□□□□□ -0.38
LMO3-224ENST00000540848 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
LMO3-224ENST00000540848 USP35Q9P2H5 1018 aa12.65□□□□□ -0.38
LMO3-224ENST00000540848 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
LMO3-224ENST00000540848 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
LMO3-224ENST00000540848 ATP10DQ9P241 1426 aa12.65□□□□□ -0.38
LMO3-224ENST00000540848 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
LMO3-224ENST00000540848 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 C1orf141Q5JVX7 400 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 ANKRD45Q5TZF3 282 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
LMO3-224ENST00000540848 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 GNAI3P08754 354 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 FLIIQ13045 1269 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
LMO3-224ENST00000540848 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 LNPKQ9C0E8 428 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
LMO3-224ENST00000540848 TEFQ10587 303 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms