RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 COL15A1P39059 1388 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
LCOR-209ENST00000540664 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
LCOR-209ENST00000540664 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
LCOR-209ENST00000540664 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
LCOR-209ENST00000540664 ZCRB1Q8TBF4 217 aaKnown RBP11.69□□□□□ -0.54
LCOR-209ENST00000540664 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 AIMP1Q12904 312 aaKnown RBP11.68□□□□□ -0.54
LCOR-209ENST00000540664 RAB3GAP1Q15042 981 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 ANAPC15P60006 121 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 GCKRQ14397 625 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 TOM1L2Q6ZVM7 507 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
LCOR-209ENST00000540664 TNS2Q63HR2 1409 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 MYL6BP14649 208 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
LCOR-209ENST00000540664 AHDC1Q5TGY3 1603 aaPredicted RBP11.67□□□□□ -0.54
LCOR-209ENST00000540664 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
LCOR-209ENST00000540664 NUP188Q5SRE5 1749 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 IL2RBP14784 551 aa11.67□□□□□ -0.54
LCOR-209ENST00000540664 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
LCOR-209ENST00000540664 ST18O60284 1047 aa11.66□□□□□ -0.54
LCOR-209ENST00000540664 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
LCOR-209ENST00000540664 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
LCOR-209ENST00000540664 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
LCOR-209ENST00000540664 TNPO1Q92973 898 aaKnown RBP11.66□□□□□ -0.54
LCOR-209ENST00000540664 MYD88Q99836 296 aa11.66□□□□□ -0.54
LCOR-209ENST00000540664 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
LCOR-209ENST00000540664 SASH1O94885 1247 aa11.65□□□□□ -0.54
LCOR-209ENST00000540664 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
LCOR-209ENST00000540664 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
LCOR-209ENST00000540664 IL25Q9H293 177 aa11.65□□□□□ -0.54
LCOR-209ENST00000540664 COL22A1Q8NFW1 1626 aaPredicted RBP11.65□□□□□ -0.54
LCOR-209ENST00000540664 SGSM2O43147 1006 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
LCOR-209ENST00000540664 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
LCOR-209ENST00000540664 MCCP23508 829 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
LCOR-209ENST00000540664 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
LCOR-209ENST00000540664 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
LCOR-209ENST00000540664 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
LCOR-209ENST00000540664 CASP7P55210 303 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 EVA1CP58658 441 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 ANO2Q9NQ90 1003 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 TJP1Q07157 1748 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 COL16A1Q07092 1604 aaPredicted RBP11.63□□□□□ -0.55
LCOR-209ENST00000540664 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
LCOR-209ENST00000540664 HSPA4P34932 840 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 RFX5P48382 616 aaPredicted RBP11.63□□□□□ -0.55
LCOR-209ENST00000540664 MCM2P49736 904 aa11.63□□□□□ -0.55
LCOR-209ENST00000540664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
LCOR-209ENST00000540664 RAD50Q92878 1312 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 MAP4K4O95819 1239 aaPredicted RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
LCOR-209ENST00000540664 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 DISP2A7MBM2 1401 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
LCOR-209ENST00000540664 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
LCOR-209ENST00000540664 NEK4P51957 841 aa11.61□□□□□ -0.55
LCOR-209ENST00000540664 AACSQ86V21 672 aa11.61□□□□□ -0.55
LCOR-209ENST00000540664 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
LCOR-209ENST00000540664 H7C1W4 665 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 TRAK2O60296 914 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 NUCB2P80303 420 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 CUL4AQ13619 759 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 LRP6O75581 1613 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 PTMSP20962 102 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 SSFA2P28290 1259 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
LCOR-209ENST00000540664 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
LCOR-209ENST00000540664 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
LCOR-209ENST00000540664 A0A087WZG4 1122 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 ATP5J2-PTCD1G3V325 749 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
LCOR-209ENST00000540664 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms