RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CHPF2Q9P2E5 772 aa14.77□□□□□ -0.04
NPC1-202ENST00000540608 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.04
NPC1-202ENST00000540608 CRYBG1Q9Y4K1 1723 aa14.77□□□□□ -0.05
NPC1-202ENST00000540608 UQCRHLA0A096LP55 91 aa14.77□□□□□ -0.05
NPC1-202ENST00000540608 UQCRHP07919 91 aa14.77□□□□□ -0.05
NPC1-202ENST00000540608 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
NPC1-202ENST00000540608 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.05
NPC1-202ENST00000540608 CHD2O14647 1828 aaKnown RBP14.77□□□□□ -0.05
NPC1-202ENST00000540608 KCNQ3O43525 872 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 F13A1P00488 732 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 MED1Q15648 1581 aaPredicted RBP14.76□□□□□ -0.05
NPC1-202ENST00000540608 MTX1Q13505 466 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 ESCO1Q5FWF5 840 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 SASS6Q6UVJ0 657 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 VSIG10Q8N0Z9 540 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 LRRC59Q96AG4 307 aaKnown RBP14.76□□□□□ -0.05
NPC1-202ENST00000540608 MAP7D2Q96T17 732 aa14.76□□□□□ -0.05
NPC1-202ENST00000540608 CASTP20810 708 aaKnown RBP14.75□□□□□ -0.05
NPC1-202ENST00000540608 RBM10P98175 930 aaKnown RBP14.75□□□□□ -0.05
NPC1-202ENST00000540608 KCNB2Q92953 911 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
NPC1-202ENST00000540608 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 DYNC1I1O14576 645 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 PSME1Q06323 249 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 VPS53Q5VIR6 699 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
NPC1-202ENST00000540608 CLASRPQ8N2M8 674 aaKnown RBP14.74□□□□□ -0.05
NPC1-202ENST00000540608 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
NPC1-202ENST00000540608 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
NPC1-202ENST00000540608 ANKLE2Q86XL3 938 aa14.74□□□□□ -0.05
NPC1-202ENST00000540608 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
NPC1-202ENST00000540608 ANXA1P04083 346 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 PTH1RQ03431 593 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 ZSWIM6Q9HCJ5 1215 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 ECHDC1Q9NTX5 307 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 KDM3BQ7LBC6 1761 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 ADCY9O60503 1353 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 CPA1P15085 419 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
NPC1-202ENST00000540608 FAM13BQ9NYF5 915 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 USP25Q9UHP3 1055 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 LARGE1O95461 756 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 ADCY5O95622 1261 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 GJB2P29033 226 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
NPC1-202ENST00000540608 ZNF530Q6P9A1 599 aaPredicted RBP14.72□□□□□ -0.05
NPC1-202ENST00000540608 KCNH5Q8NCM2 988 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 GPATCH3Q96I76 525 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 JAKMIP1Q96N16 626 aaKnown RBP14.72□□□□□ -0.05
NPC1-202ENST00000540608 MTMR6Q9Y217 621 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 CYP46A1Q9Y6A2 500 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 FIBPO43427 364 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 ALDH1L1O75891 902 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 HCLS1P14317 486 aaPredicted RBP14.72□□□□□ -0.05
NPC1-202ENST00000540608 ADCK5Q3MIX3 580 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 PRPF40BQ6NWY9 871 aaKnown RBP14.72□□□□□ -0.05
NPC1-202ENST00000540608 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 FUCA2Q9BTY2 467 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 DBF4Q9UBU7 674 aaPredicted RBP14.72□□□□□ -0.05
NPC1-202ENST00000540608 HDAC5Q9UQL6 1122 aa14.72□□□□□ -0.05
NPC1-202ENST00000540608 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 KDM4AO75164 1064 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 NECTIN1Q15223 517 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 AKAP4Q5JQC9 854 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 PIBF1Q8WXW3 757 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 ADGRL3Q9HAR2 1447 aa14.71□□□□□ -0.05
NPC1-202ENST00000540608 KDM4FA0A1W2PPD8 638 aa14.71□□□□□ -0.06
NPC1-202ENST00000540608 IFIT2P09913 472 aaKnown RBP14.71□□□□□ -0.06
NPC1-202ENST00000540608 TEFQ10587 303 aa14.71□□□□□ -0.06
NPC1-202ENST00000540608 LMO7Q8WWI1 1683 aa14.7□□□□□ -0.06
NPC1-202ENST00000540608 MTERF4Q7Z6M4 381 aaKnown RBP14.7□□□□□ -0.06
NPC1-202ENST00000540608 C9orf78Q9NZ63 289 aaPredicted RBP14.7□□□□□ -0.06
NPC1-202ENST00000540608 PXDNQ92626 1479 aa14.7□□□□□ -0.06
NPC1-202ENST00000540608 DNM1Q05193 864 aaKnown RBP14.7□□□□□ -0.06
NPC1-202ENST00000540608 ORAI2Q96SN7 254 aa14.7□□□□□ -0.06
NPC1-202ENST00000540608 PHRF1Q9P1Y6 1649 aaKnown RBP14.69□□□□□ -0.06
NPC1-202ENST00000540608 PDIA4P13667 645 aaKnown RBP14.69□□□□□ -0.06
NPC1-202ENST00000540608 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
NPC1-202ENST00000540608 ZMYND15Q9H091 742 aa14.69□□□□□ -0.06
NPC1-202ENST00000540608 MAP3K2Q9Y2U5 619 aa14.69□□□□□ -0.06
NPC1-202ENST00000540608 GCP02774 474 aa14.69□□□□□ -0.06
NPC1-202ENST00000540608 ZKSCAN1P17029 563 aaPredicted RBP14.69□□□□□ -0.06
NPC1-202ENST00000540608 NOLC1Q14978 699 aaKnown RBP eCLIP14.69□□□□□ -0.068e-6■■□□□ 11.9
NPC1-202ENST00000540608 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
NPC1-202ENST00000540608 KSR2Q6VAB6 950 aa14.69□□□□□ -0.06
NPC1-202ENST00000540608 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
NPC1-202ENST00000540608 ME3Q16798 604 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 TPRNQ4KMQ1 711 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 HIP1O00291 1037 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
NPC1-202ENST00000540608 ST3GAL1Q11201 340 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
NPC1-202ENST00000540608 AACSQ86V21 672 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 331.1 ms