RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
PHC1-208ENST00000540574 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
PHC1-208ENST00000540574 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
PHC1-208ENST00000540574 GPTP24298 496 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
PHC1-208ENST00000540574 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
PHC1-208ENST00000540574 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
PHC1-208ENST00000540574 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 CDK12Q9NYV4 1490 aaPredicted RBP11.8□□□□□ -0.52
PHC1-208ENST00000540574 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 STX6O43752 255 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
PHC1-208ENST00000540574 NMIQ13287 307 aaPredicted RBP11.8□□□□□ -0.52
PHC1-208ENST00000540574 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
PHC1-208ENST00000540574 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 MYO5BQ9ULV0 1848 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 GOLIM4O00461 696 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 HAND2P61296 217 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 RASEFQ8IZ41 740 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 HYPKQ9NX55 129 aa11.8□□□□□ -0.52
PHC1-208ENST00000540574 LMBRD1Q9NUN5 540 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 CPSF1Q10570 1443 aaKnown RBP11.79□□□□□ -0.52
PHC1-208ENST00000540574 PSMA5P28066 241 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 LMBR1LQ6UX01 489 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 CLTCQ00610 1675 aaKnown RBP11.79□□□□□ -0.52
PHC1-208ENST00000540574 AK9Q5TCS8 1911 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 PTH1RQ03431 593 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
PHC1-208ENST00000540574 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
PHC1-208ENST00000540574 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
PHC1-208ENST00000540574 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
PHC1-208ENST00000540574 CPLX1O14810 134 aa11.78□□□□□ -0.52
PHC1-208ENST00000540574 ATP2B1P20020 1258 aa11.78□□□□□ -0.52
PHC1-208ENST00000540574 TIMM10P62072 90 aa11.78□□□□□ -0.52
PHC1-208ENST00000540574 SNX14Q9Y5W7 946 aa11.78□□□□□ -0.52
PHC1-208ENST00000540574 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
PHC1-208ENST00000540574 TLR7Q9NYK1 1049 aaKnown RBP11.78□□□□□ -0.52
PHC1-208ENST00000540574 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.52
PHC1-208ENST00000540574 IL25Q9H293 177 aa11.77□□□□□ -0.52
PHC1-208ENST00000540574 AXIN2Q9Y2T1 843 aa11.77□□□□□ -0.52
PHC1-208ENST00000540574 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 BECN2A8MW95 431 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 SIGLEC1Q9BZZ2 1709 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 SYT1P21579 422 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
PHC1-208ENST00000540574 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 BEND3Q5T5X7 828 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 GPT2Q8TD30 523 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
PHC1-208ENST00000540574 COL3A1P02461 1466 aaPredicted RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 SGSM2O43147 1006 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 TFCP2Q12800 502 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 EAF2Q96CJ1 260 aaPredicted RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 SHPRHQ149N8 1683 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 KRT85P78386 507 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 CCDC57Q2TAC2 916 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
PHC1-208ENST00000540574 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
PHC1-208ENST00000540574 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 A1BGP04217 495 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 BRF1Q92994 677 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 TRIM5Q9C035 493 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 SASS6Q6UVJ0 657 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
PHC1-208ENST00000540574 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
PHC1-208ENST00000540574 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 PLEKHG1Q9ULL1 1385 aa11.75□□□□□ -0.53
PHC1-208ENST00000540574 PREX1Q8TCU6 1659 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 NLRP1Q9C000 1473 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
PHC1-208ENST00000540574 TTC39AQ5SRH9 613 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
PHC1-208ENST00000540574 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
PHC1-208ENST00000540574 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms