RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 NUP98P52948 1817 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 RGL2O15211 777 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 ZPR1O75312 459 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 RFC4P35249 363 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 G2E3Q7L622 706 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 PLBD2Q8NHP8 589 aa13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
PPFIBP1-212ENST00000540503 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 DNAAF4Q8WXU2 420 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
PPFIBP1-212ENST00000540503 ADCY9O60503 1353 aa13.08□□□□□ -0.31
PPFIBP1-212ENST00000540503 ATP10DQ9P241 1426 aa13.08□□□□□ -0.32
PPFIBP1-212ENST00000540503 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
PPFIBP1-212ENST00000540503 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
PPFIBP1-212ENST00000540503 ABCC4O15439 1325 aa13.08□□□□□ -0.32
PPFIBP1-212ENST00000540503 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
PPFIBP1-212ENST00000540503 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 MSH5O43196 834 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 TRIM27P14373 513 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
PPFIBP1-212ENST00000540503 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
PPFIBP1-212ENST00000540503 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
PPFIBP1-212ENST00000540503 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
PPFIBP1-212ENST00000540503 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
PPFIBP1-212ENST00000540503 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
PPFIBP1-212ENST00000540503 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
PPFIBP1-212ENST00000540503 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
PPFIBP1-212ENST00000540503 F6X3S4 739 aa13.05□□□□□ -0.32
PPFIBP1-212ENST00000540503 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
PPFIBP1-212ENST00000540503 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
PPFIBP1-212ENST00000540503 SOCS7O14512 581 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 PLIN1O60240 522 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 NEFLP07196 543 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 MYD88Q99836 296 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 SRCIN1Q9C0H9 1055 aa13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
PPFIBP1-212ENST00000540503 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
PPFIBP1-212ENST00000540503 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
PPFIBP1-212ENST00000540503 LINS1Q8NG48 757 aa13.03□□□□□ -0.32
PPFIBP1-212ENST00000540503 SLC16A10Q8TF71 515 aa13.03□□□□□ -0.32
PPFIBP1-212ENST00000540503 GYS1P13807 737 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 HLFQ16534 295 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 BEND3Q5T5X7 828 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
PPFIBP1-212ENST00000540503 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 LAMB2P55268 1798 aa13.01□□□□□ -0.33
PPFIBP1-212ENST00000540503 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 RLBP1P12271 317 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 GPTP24298 496 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 FKBP8Q14318 412 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 NYXQ9GZU5 481 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
PPFIBP1-212ENST00000540503 IGKV5-2P06315 115 aa12.99□□□□□ -0.33
PPFIBP1-212ENST00000540503 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
PPFIBP1-212ENST00000540503 TBC1D9BQ66K14 1250 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms