RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 POTECB2RU33 542 aa16.67■□□□□ 0.26
COPS7A-211ENST00000540408 KCNQ3O43525 872 aa16.67■□□□□ 0.26
COPS7A-211ENST00000540408 SRGNP10124 158 aa16.67■□□□□ 0.26
COPS7A-211ENST00000540408 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
COPS7A-211ENST00000540408 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
COPS7A-211ENST00000540408 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
COPS7A-211ENST00000540408 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
COPS7A-211ENST00000540408 TIAM2Q8IVF5 1701 aa16.66■□□□□ 0.26
COPS7A-211ENST00000540408 TNS4Q8IZW8 715 aa16.66■□□□□ 0.26
COPS7A-211ENST00000540408 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
COPS7A-211ENST00000540408 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
COPS7A-211ENST00000540408 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
COPS7A-211ENST00000540408 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
COPS7A-211ENST00000540408 DDNO94850 711 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-211ENST00000540408 HSPA1AP0DMV8 641 aaKnown RBP16.64■□□□□ 0.25
COPS7A-211ENST00000540408 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
COPS7A-211ENST00000540408 NPR1P16066 1061 aa16.64■□□□□ 0.25
COPS7A-211ENST00000540408 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
COPS7A-211ENST00000540408 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
COPS7A-211ENST00000540408 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-211ENST00000540408 RGL2O15211 777 aa16.63■□□□□ 0.25
COPS7A-211ENST00000540408 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
COPS7A-211ENST00000540408 NEFMP07197 916 aa16.63■□□□□ 0.25
COPS7A-211ENST00000540408 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-211ENST00000540408 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-211ENST00000540408 MCM10Q7L590 875 aa16.63■□□□□ 0.25
COPS7A-211ENST00000540408 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
COPS7A-211ENST00000540408 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
COPS7A-211ENST00000540408 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
COPS7A-211ENST00000540408 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
COPS7A-211ENST00000540408 CAPN15O75808 1086 aa16.61■□□□□ 0.25
COPS7A-211ENST00000540408 ALDH1B1P30837 517 aa16.61■□□□□ 0.25
COPS7A-211ENST00000540408 TAF7Q15545 349 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-211ENST00000540408 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
COPS7A-211ENST00000540408 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
COPS7A-211ENST00000540408 COL11A2P13942 1736 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-211ENST00000540408 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
COPS7A-211ENST00000540408 KLRG2A4D1S0 409 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-211ENST00000540408 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
COPS7A-211ENST00000540408 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
COPS7A-211ENST00000540408 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
COPS7A-211ENST00000540408 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
COPS7A-211ENST00000540408 C7orf43Q8WVR3 580 aa16.59■□□□□ 0.25
COPS7A-211ENST00000540408 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
COPS7A-211ENST00000540408 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-211ENST00000540408 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
COPS7A-211ENST00000540408 BCORQ6W2J9 1755 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
COPS7A-211ENST00000540408 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
COPS7A-211ENST00000540408 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 TAF1DQ9H5J8 278 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-211ENST00000540408 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-211ENST00000540408 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
COPS7A-211ENST00000540408 EAPPQ56P03 285 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-211ENST00000540408 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
COPS7A-211ENST00000540408 CACNA1SQ13698 1873 aa16.55■□□□□ 0.24
COPS7A-211ENST00000540408 HLFQ16534 295 aa16.55■□□□□ 0.24
COPS7A-211ENST00000540408 PNMA8AQ86V59 439 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-211ENST00000540408 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
COPS7A-211ENST00000540408 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
COPS7A-211ENST00000540408 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
COPS7A-211ENST00000540408 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
COPS7A-211ENST00000540408 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
COPS7A-211ENST00000540408 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
COPS7A-211ENST00000540408 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
COPS7A-211ENST00000540408 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
COPS7A-211ENST00000540408 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 EPHX2P34913 555 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
COPS7A-211ENST00000540408 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
COPS7A-211ENST00000540408 SCN4AP35499 1836 aa16.53■□□□□ 0.24
COPS7A-211ENST00000540408 PCNTO95613 3336 aa16.52■□□□□ 0.24
COPS7A-211ENST00000540408 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
COPS7A-211ENST00000540408 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
COPS7A-211ENST00000540408 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
COPS7A-211ENST00000540408 CNTNAP1P78357 1384 aa16.51■□□□□ 0.23
COPS7A-211ENST00000540408 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
COPS7A-211ENST00000540408 FZD9O00144 591 aa16.51■□□□□ 0.23
COPS7A-211ENST00000540408 EIF6P56537 245 aaKnown RBP16.51■□□□□ 0.23
COPS7A-211ENST00000540408 GPC2Q8N158 579 aa16.51■□□□□ 0.23
COPS7A-211ENST00000540408 PSMD1Q99460 953 aa16.51■□□□□ 0.23
COPS7A-211ENST00000540408 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-211ENST00000540408 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
COPS7A-211ENST00000540408 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-211ENST00000540408 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
COPS7A-211ENST00000540408 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
COPS7A-211ENST00000540408 CNTROBQ8N137 903 aa16.5■□□□□ 0.23
COPS7A-211ENST00000540408 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
COPS7A-211ENST00000540408 MYL6BP14649 208 aa16.49■□□□□ 0.23
COPS7A-211ENST00000540408 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
COPS7A-211ENST00000540408 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
COPS7A-211ENST00000540408 GPTP24298 496 aa16.48■□□□□ 0.23
COPS7A-211ENST00000540408 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms