RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TMPRSS4Q9NRS4 437 aa6.37□□□□□ -1.39
C2CD3-214ENST00000540057 CHD2O14647 1828 aaKnown RBP6.36□□□□□ -1.39
C2CD3-214ENST00000540057 LILRA1O75019 489 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 NBPF20Q3BBV1 942 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 TMEM259Q4ZIN3 620 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 ZNF784Q8NCA9 323 aaPredicted RBP6.36□□□□□ -1.39
C2CD3-214ENST00000540057 PNMA1Q8ND90 353 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 C8orf37Q96NL8 207 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.36□□□□□ -1.39
C2CD3-214ENST00000540057 LRP5O75197 1615 aa6.36□□□□□ -1.39
C2CD3-214ENST00000540057 MAST1Q9Y2H9 1570 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 EFCAB6Q5THR3 1501 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 ARHGAP31Q2M1Z3 1444 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 MTUS2Q5JR59 1369 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 ERVH48-1M5A8F1 160 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 FBXO45P0C2W1 286 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 PTSQ03393 145 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.35□□□□□ -1.39
C2CD3-214ENST00000540057 BRINP3Q76B58 766 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 KDF1Q8NAX2 398 aaPredicted RBP6.35□□□□□ -1.39
C2CD3-214ENST00000540057 ZSCAN1Q8NBB4 408 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 NGLY1Q96IV0 654 aa6.35□□□□□ -1.39
C2CD3-214ENST00000540057 EIF2AK4Q9P2K8 1649 aaKnown RBP6.35□□□□□ -1.39
C2CD3-214ENST00000540057 SETD5Q9C0A6 1442 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 NCOA3Q9Y6Q9 1424 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 EP400Q96L91 3159 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 FIGNL2A6NMB9 653 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 ADH1AP07327 375 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 ADD1P35611 737 aaKnown RBP6.34□□□□□ -1.39
C2CD3-214ENST00000540057 CTSOP43234 321 aaPredicted RBP6.34□□□□□ -1.39
C2CD3-214ENST00000540057 RAB15P59190 212 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 RELBQ01201 579 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 IDI1Q13907 227 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 DZIP3Q86Y13 1208 aaKnown RBP6.34□□□□□ -1.39
C2CD3-214ENST00000540057 CCDC125Q86Z20 511 aa6.34□□□□□ -1.39
C2CD3-214ENST00000540057 ARHGEF5Q12774 1597 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 TSPY4P0CV99 314 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 TSPY10P0CW01 314 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 KRT76Q01546 638 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
C2CD3-214ENST00000540057 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 CEP162Q5TB80 1403 aa6.33□□□□□ -1.4
C2CD3-214ENST00000540057 ASXL1Q8IXJ9 1541 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 EHBP1L1Q8N3D4 1523 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 SLC35F4A4IF30 521 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 ZBBXA8MT70 800 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 ATF3P18847 181 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 FOXD4L5Q5VV16 416 aaPredicted RBP6.32□□□□□ -1.4
C2CD3-214ENST00000540057 C14orf37Q86TY3 774 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 GPR161Q8N6U8 529 aaKnown RBP6.32□□□□□ -1.4
C2CD3-214ENST00000540057 MTMR14Q8NCE2 650 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 NHSL1Q5SYE7 1610 aa6.32□□□□□ -1.4
C2CD3-214ENST00000540057 PNPLA6Q8IY17 1366 aa6.31□□□□□ -1.4
C2CD3-214ENST00000540057 ADAMTS2O95450 1211 aa6.31□□□□□ -1.4
C2CD3-214ENST00000540057 SEPT12Q8IYM1 358 aa6.31□□□□□ -1.4
C2CD3-214ENST00000540057 CCDC155Q8N6L0 562 aa6.31□□□□□ -1.4
C2CD3-214ENST00000540057 LRRC59Q96AG4 307 aaKnown RBP6.31□□□□□ -1.4
C2CD3-214ENST00000540057 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-214ENST00000540057 TRPC5Q9UL62 973 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-214ENST00000540057 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
C2CD3-214ENST00000540057 ADGRB3O60242 1522 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 GIGYF1O75420 1035 aaPredicted RBP6.3□□□□□ -1.4
C2CD3-214ENST00000540057 PTGIRP43119 386 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 DEFB132Q7Z7B7 95 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 NANOS1Q8WY41 292 aaKnown RBP6.3□□□□□ -1.4
C2CD3-214ENST00000540057 DDX17Q92841 729 aaKnown RBP6.3□□□□□ -1.4
C2CD3-214ENST00000540057 CYLDQ9NQC7 956 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 USP21Q9UK80 565 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 PCDHB9Q9Y5E1 797 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 ATRNO75882 1429 aa6.3□□□□□ -1.4
C2CD3-214ENST00000540057 ZFYVE9O95405 1425 aa6.29□□□□□ -1.4
C2CD3-214ENST00000540057 BLMP54132 1417 aaPredicted RBP6.29□□□□□ -1.4
C2CD3-214ENST00000540057 FNBP4Q8N3X1 1017 aaPredicted RBP6.29□□□□□ -1.4
C2CD3-214ENST00000540057 BANK1Q8NDB2 785 aa6.29□□□□□ -1.4
C2CD3-214ENST00000540057 POLMQ9NP87 494 aaPredicted RBP6.29□□□□□ -1.4
C2CD3-214ENST00000540057 TBX22Q9Y458 520 aa6.29□□□□□ -1.4
C2CD3-214ENST00000540057 MYO5BQ9ULV0 1848 aa6.29□□□□□ -1.4
C2CD3-214ENST00000540057 NOS1P29475 1434 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 MST1RQ04912 1400 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 NR1H3Q13133 447 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 TPRNQ4KMQ1 711 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 SNRKQ9NRH2 765 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 DUOX2Q9NRD8 1548 aa6.28□□□□□ -1.4
C2CD3-214ENST00000540057 DCCP43146 1447 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 ADAMTS13Q76LX8 1427 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 ITGA6P23229 1130 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 YY1P25490 414 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 ERVK-9P63128 1117 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 RNFT1Q5M7Z0 435 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 BCL9LQ86UU0 1499 aa6.27□□□□□ -1.41
C2CD3-214ENST00000540057 PTPRUQ92729 1446 aa6.26□□□□□ -1.41
C2CD3-214ENST00000540057 LMTK2Q8IWU2 1503 aa6.26□□□□□ -1.41
C2CD3-214ENST00000540057 PPP1R15AO75807 674 aaPredicted RBP6.26□□□□□ -1.41
C2CD3-214ENST00000540057 SLC52A1Q9NWF4 448 aa6.26□□□□□ -1.41
C2CD3-214ENST00000540057 NDUFB9Q9Y6M9 179 aa6.26□□□□□ -1.41
C2CD3-214ENST00000540057 PIK3R4Q99570 1358 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms