RNA–Protein interactions for RNA: ENST00000539613.5

RHBDD1-215, Transcript of rhomboid domain containing 1, humanhuman

TSL 4

Gene RHBDD1, Length 559 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-215ENST00000539613 CNKSR1Q969H4 720 aa27.84■■■□□ 2.05
RHBDD1-215ENST00000539613 POTECB2RU33 542 aa27.83■■■□□ 2.05
RHBDD1-215ENST00000539613 PIP4K2AP48426 406 aaPredicted RBP27.83■■■□□ 2.05
RHBDD1-215ENST00000539613 CEMIPQ8WUJ3 1361 aa27.83■■■□□ 2.05
RHBDD1-215ENST00000539613 KCNQ3O43525 872 aa27.82■■■□□ 2.04
RHBDD1-215ENST00000539613 PRKAR2BP31323 418 aa27.82■■■□□ 2.04
RHBDD1-215ENST00000539613 LTBP3Q9NS15 1303 aa27.82■■■□□ 2.04
RHBDD1-215ENST00000539613 NPC1L1Q9UHC9 1359 aa27.82■■■□□ 2.04
RHBDD1-215ENST00000539613 STYK1Q6J9G0 422 aa27.81■■■□□ 2.04
RHBDD1-215ENST00000539613 SOGA3Q5TF21 947 aa27.8■■■□□ 2.04
RHBDD1-215ENST00000539613 CFAP53Q96M91 514 aa27.8■■■□□ 2.04
RHBDD1-215ENST00000539613 DDNO94850 711 aaPredicted RBP27.79■■■□□ 2.04
RHBDD1-215ENST00000539613 SRGNP10124 158 aa27.79■■■□□ 2.04
RHBDD1-215ENST00000539613 NBPF5PQ86XG9 351 aaPredicted RBP27.79■■■□□ 2.04
RHBDD1-215ENST00000539613 MASTLQ96GX5 879 aa27.79■■■□□ 2.04
RHBDD1-215ENST00000539613 CHADLQ6NUI6 762 aa27.78■■■□□ 2.04
RHBDD1-215ENST00000539613 PHACTR3Q96KR7 559 aa27.78■■■□□ 2.04
RHBDD1-215ENST00000539613 ZNF652Q9Y2D9 606 aa27.78■■■□□ 2.04
RHBDD1-215ENST00000539613 SCN4AP35499 1836 aa27.78■■■□□ 2.04
RHBDD1-215ENST00000539613 LAMB4A4D0S4 1761 aa27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 POTEIP0CG38 1075 aa27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 POTEJP0CG39 1038 aa27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 RTF1Q92541 710 aaKnown RBP27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 RSPH6AQ9H0K4 717 aa27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 MKRN1Q9UHC7 482 aaKnown RBP27.76■■■□□ 2.03
RHBDD1-215ENST00000539613 PRAMEF22A3QJZ6 481 aa27.75■■■□□ 2.03
RHBDD1-215ENST00000539613 USP16Q9Y5T5 823 aa27.75■■■□□ 2.03
RHBDD1-215ENST00000539613 CCDC93Q567U6 631 aa27.74■■■□□ 2.03
RHBDD1-215ENST00000539613 CREBZFQ9NS37 354 aa27.74■■■□□ 2.03
RHBDD1-215ENST00000539613 MCM10Q7L590 875 aa27.73■■■□□ 2.03
RHBDD1-215ENST00000539613 IQCA1LA6NCM1 817 aa27.72■■■□□ 2.03
RHBDD1-215ENST00000539613 FAM177BA6PVY3 158 aa27.72■■■□□ 2.03
RHBDD1-215ENST00000539613 SNRPA1P09661 255 aaKnown RBP27.72■■■□□ 2.03
RHBDD1-215ENST00000539613 NUDCQ9Y266 331 aa27.72■■■□□ 2.03
RHBDD1-215ENST00000539613 U2AF1L5P0DN76 240 aaPredicted RBP27.71■■■□□ 2.03
RHBDD1-215ENST00000539613 U2AF1Q01081 240 aaKnown RBP eCLIP27.71■■■□□ 2.03
RHBDD1-215ENST00000539613 NIP7Q9Y221 180 aaKnown RBP eCLIP27.71■■■□□ 2.03
RHBDD1-215ENST00000539613 NPR1P16066 1061 aa27.7■■■□□ 2.02
RHBDD1-215ENST00000539613 CLEC4GQ6UXB4 293 aa27.7■■■□□ 2.02
RHBDD1-215ENST00000539613 EAPPQ56P03 285 aaPredicted RBP27.68■■■□□ 2.02
RHBDD1-215ENST00000539613 LDHDQ86WU2 507 aa27.68■■■□□ 2.02
RHBDD1-215ENST00000539613 ZNF277Q9NRM2 450 aaPredicted RBP27.68■■■□□ 2.02
RHBDD1-215ENST00000539613 DCTN1Q14203 1278 aa27.67■■■□□ 2.02
RHBDD1-215ENST00000539613 DLG5Q8TDM6 1919 aa27.67■■■□□ 2.02
RHBDD1-215ENST00000539613 ZNF541Q9H0D2 1346 aa27.67■■■□□ 2.02
RHBDD1-215ENST00000539613 GTF2E1P29083 439 aaPredicted RBP27.66■■■□□ 2.02
RHBDD1-215ENST00000539613 FKBP4Q02790 459 aaKnown RBP eCLIP27.66■■■□□ 2.02
RHBDD1-215ENST00000539613 TPTE2Q6XPS3 522 aa27.66■■■□□ 2.02
RHBDD1-215ENST00000539613 TAF1DQ9H5J8 278 aaPredicted RBP27.66■■■□□ 2.02
RHBDD1-215ENST00000539613 OLFM4Q6UX06 510 aa27.65■■■□□ 2.02
RHBDD1-215ENST00000539613 L3MBTL3Q96JM7 780 aaPredicted RBP27.65■■■□□ 2.02
RHBDD1-215ENST00000539613 CNTNAP1P78357 1384 aa27.64■■■□□ 2.02
RHBDD1-215ENST00000539613 C7orf43Q8WVR3 580 aa27.64■■■□□ 2.02
RHBDD1-215ENST00000539613 NUP98P52948 1817 aa27.64■■■□□ 2.01
RHBDD1-215ENST00000539613 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
RHBDD1-215ENST00000539613 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
RHBDD1-215ENST00000539613 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
RHBDD1-215ENST00000539613 CLEC11AQ9Y240 323 aa27.63■■■□□ 2.01
RHBDD1-215ENST00000539613 KDM3BQ7LBC6 1761 aa27.63■■■□□ 2.01
RHBDD1-215ENST00000539613 HACL1Q9UJ83 578 aa27.62■■■□□ 2.01
RHBDD1-215ENST00000539613 ADAMTSL1Q8N6G6 1762 aa27.61■■■□□ 2.01
RHBDD1-215ENST00000539613 RTKN2Q8IZC4 609 aa27.61■■■□□ 2.01
RHBDD1-215ENST00000539613 PASKQ96RG2 1323 aa27.61■■■□□ 2.01
RHBDD1-215ENST00000539613 NGEFQ8N5V2 710 aa27.6■■■□□ 2.01
RHBDD1-215ENST00000539613 RNF123Q5XPI4 1314 aa27.6■■■□□ 2.01
RHBDD1-215ENST00000539613 PPP2R1AP30153 589 aa27.59■■■□□ 2.01
RHBDD1-215ENST00000539613 HLFQ16534 295 aa27.59■■■□□ 2.01
RHBDD1-215ENST00000539613 AIDAQ96BJ3 306 aa27.59■■■□□ 2.01
RHBDD1-215ENST00000539613 TMEM88BA6NKF7 163 aa27.58■■■□□ 2.01
RHBDD1-215ENST00000539613 FOXN1O15353 648 aa27.58■■■□□ 2.01
RHBDD1-215ENST00000539613 EPHX2P34913 555 aa27.58■■■□□ 2.01
RHBDD1-215ENST00000539613 IARSP41252 1262 aaKnown RBP27.58■■■□□ 2.01
RHBDD1-215ENST00000539613 ABCC12Q96J65 1359 aa27.58■■■□□ 2.01
RHBDD1-215ENST00000539613 KLRG2A4D1S0 409 aaPredicted RBP27.57■■■□□ 2
RHBDD1-215ENST00000539613 RGL2O15211 777 aa27.57■■■□□ 2
RHBDD1-215ENST00000539613 ALDH1B1P30837 517 aa27.57■■■□□ 2
RHBDD1-215ENST00000539613 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
RHBDD1-215ENST00000539613 NEFMP07197 916 aa27.56■■■□□ 2
RHBDD1-215ENST00000539613 TAF7Q15545 349 aaPredicted RBP27.56■■■□□ 2
RHBDD1-215ENST00000539613 SYNE4Q8N205 404 aa27.56■■■□□ 2
RHBDD1-215ENST00000539613 HTATSF1O43719 755 aaKnown RBP27.55■■■□□ 2
RHBDD1-215ENST00000539613 NUTM1Q86Y26 1132 aa27.55■■■□□ 2
RHBDD1-215ENST00000539613 NYXQ9GZU5 481 aa27.55■■■□□ 2
RHBDD1-215ENST00000539613 KIF6Q6ZMV9 814 aa27.54■■■□□ 2
RHBDD1-215ENST00000539613 JDP2Q8WYK2 163 aa27.54■■■□□ 2
RHBDD1-215ENST00000539613 VEGFBP49765 207 aa27.53■■■□□ 2
RHBDD1-215ENST00000539613 PNMA8AQ86V59 439 aaPredicted RBP27.53■■■□□ 2
RHBDD1-215ENST00000539613 RPGRQ92834 1020 aaKnown RBP27.53■■■□□ 2
RHBDD1-215ENST00000539613 ITGBL1O95965 494 aaPredicted RBP27.52■■■□□ 2
RHBDD1-215ENST00000539613 MAP1SQ66K74 1059 aaPredicted RBP27.52■■■□□ 2
RHBDD1-215ENST00000539613 GJA3Q9Y6H8 435 aa27.52■■■□□ 2
RHBDD1-215ENST00000539613 FZD9O00144 591 aa27.51■■□□□ 1.99
RHBDD1-215ENST00000539613 GPTP24298 496 aa27.51■■□□□ 1.99
RHBDD1-215ENST00000539613 GPC2Q8N158 579 aa27.51■■□□□ 1.99
RHBDD1-215ENST00000539613 RRP7AQ9Y3A4 280 aaKnown RBP27.51■■□□□ 1.99
RHBDD1-215ENST00000539613 COL4A5P29400 1685 aa27.5■■□□□ 1.99
RHBDD1-215ENST00000539613 MAP3K15Q6ZN16 1313 aa27.5■■□□□ 1.99
RHBDD1-215ENST00000539613 MYL6BP14649 208 aa27.5■■□□□ 1.99
RHBDD1-215ENST00000539613 CTCFP49711 727 aaPredicted RBP27.5■■□□□ 1.99
RHBDD1-215ENST00000539613 LMOD1P29536 600 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms