RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC15A2Q16348 729 aa29.94■■■□□ 2.38
TMEM260-202ENST00000538838 KIF6Q6ZMV9 814 aa29.94■■■□□ 2.38
TMEM260-202ENST00000538838 IPO8O15397 1037 aaKnown RBP29.93■■■□□ 2.38
TMEM260-202ENST00000538838 TRIM27P14373 513 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 ATF7IPQ6VMQ6 1270 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 ZBTB3Q9H5J0 574 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 RNF123Q5XPI4 1314 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 A0A087WZG4 1122 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 PI4KAP2A4QPH2 592 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 F6X3S4 739 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 DDX58O95786 925 aaKnown RBP29.93■■■□□ 2.38
TMEM260-202ENST00000538838 PI4KAP1Q8N8J0 262 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.93■■■□□ 2.38
TMEM260-202ENST00000538838 ARHGAP45Q92619 1136 aa29.93■■■□□ 2.38
TMEM260-202ENST00000538838 ARHGEF1Q92888 912 aaKnown RBP29.93■■■□□ 2.38
TMEM260-202ENST00000538838 MAP3K15Q6ZN16 1313 aa29.92■■■□□ 2.38
TMEM260-202ENST00000538838 ADRA2BP18089 450 aa29.92■■■□□ 2.38
TMEM260-202ENST00000538838 TRAPPC3LQ5T215 181 aa29.92■■■□□ 2.38
TMEM260-202ENST00000538838 ANKRD13DQ6ZTN6 518 aa29.92■■■□□ 2.38
TMEM260-202ENST00000538838 API5Q9BZZ5 524 aaKnown RBP29.92■■■□□ 2.38
TMEM260-202ENST00000538838 KSR2Q6VAB6 950 aa29.91■■■□□ 2.38
TMEM260-202ENST00000538838 PLBD2Q8NHP8 589 aa29.91■■■□□ 2.38
TMEM260-202ENST00000538838 AFDNP55196 1824 aaKnown RBP29.9■■■□□ 2.38
TMEM260-202ENST00000538838 RIC3Q7Z5B4 369 aa29.9■■■□□ 2.38
TMEM260-202ENST00000538838 CLUAP1Q96AJ1 413 aa29.9■■■□□ 2.38
TMEM260-202ENST00000538838 MAP3K2Q9Y2U5 619 aa29.9■■■□□ 2.38
TMEM260-202ENST00000538838 PNPLA7Q6ZV29 1317 aa29.9■■■□□ 2.38
TMEM260-202ENST00000538838 CAMTA2O94983 1202 aa29.89■■■□□ 2.37
TMEM260-202ENST00000538838 SRP68Q9UHB9 627 aaKnown RBP29.89■■■□□ 2.37
TMEM260-202ENST00000538838 PXDNLA1KZ92 1463 aa29.88■■■□□ 2.37
TMEM260-202ENST00000538838 RFC4P35249 363 aa29.88■■■□□ 2.37
TMEM260-202ENST00000538838 ABCC4O15439 1325 aa29.88■■■□□ 2.37
TMEM260-202ENST00000538838 DNAAF4Q8WXU2 420 aa29.87■■■□□ 2.37
TMEM260-202ENST00000538838 NARFQ9UHQ1 456 aa29.87■■■□□ 2.37
TMEM260-202ENST00000538838 USP42Q9H9J4 1324 aaKnown RBP29.87■■■□□ 2.37
TMEM260-202ENST00000538838 HLFQ16534 295 aa29.86■■■□□ 2.37
TMEM260-202ENST00000538838 C20orf194Q5TEA3 1177 aa29.86■■■□□ 2.37
TMEM260-202ENST00000538838 USPL1Q5W0Q7 1092 aa29.86■■■□□ 2.37
TMEM260-202ENST00000538838 COL23A1Q86Y22 540 aaPredicted RBP29.86■■■□□ 2.37
TMEM260-202ENST00000538838 RLBP1P12271 317 aa29.85■■■□□ 2.37
TMEM260-202ENST00000538838 SLC4A10Q6U841 1118 aa29.85■■■□□ 2.37
TMEM260-202ENST00000538838 ERVV-1B6SEH8 477 aa29.85■■■□□ 2.37
TMEM260-202ENST00000538838 FTSJ3Q8IY81 847 aaKnown RBP29.85■■■□□ 2.37
TMEM260-202ENST00000538838 DZIP1LQ8IYY4 767 aaKnown RBP29.85■■■□□ 2.37
TMEM260-202ENST00000538838 FLAD1Q8NFF5 587 aa29.85■■■□□ 2.37
TMEM260-202ENST00000538838 ZPR1O75312 459 aa29.84■■■□□ 2.37
TMEM260-202ENST00000538838 PANK1Q8TE04 598 aa29.84■■■□□ 2.37
TMEM260-202ENST00000538838 MSH5O43196 834 aa29.83■■■□□ 2.37
TMEM260-202ENST00000538838 GIGYF2Q6Y7W6 1299 aaKnown RBP29.83■■■□□ 2.37
TMEM260-202ENST00000538838 METTL22Q9BUU2 404 aaPredicted RBP29.83■■■□□ 2.37
TMEM260-202ENST00000538838 MYD88Q99836 296 aa29.82■■■□□ 2.36
TMEM260-202ENST00000538838 BCL2L12Q9HB09 334 aa29.82■■■□□ 2.36
TMEM260-202ENST00000538838 ATP10DQ9P241 1426 aa29.82■■■□□ 2.36
TMEM260-202ENST00000538838 CASZ1Q86V15 1759 aa29.81■■■□□ 2.36
TMEM260-202ENST00000538838 TMEM57Q8N5G2 664 aa29.8■■■□□ 2.36
TMEM260-202ENST00000538838 MS4A1P11836 297 aa29.79■■■□□ 2.36
TMEM260-202ENST00000538838 PDE3AQ14432 1141 aa29.79■■■□□ 2.36
TMEM260-202ENST00000538838 ZNF652Q9Y2D9 606 aa29.79■■■□□ 2.36
TMEM260-202ENST00000538838 COL24A1Q17RW2 1714 aa29.79■■■□□ 2.36
TMEM260-202ENST00000538838 NEXNQ0ZGT2 675 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 BEND3Q5T5X7 828 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 PDGFDQ9GZP0 370 aaPredicted RBP29.78■■■□□ 2.36
TMEM260-202ENST00000538838 ATP5J2-PTCD1G3V325 749 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 IGKV5-2P06315 115 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 GYS1P13807 737 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 TCIRG1Q13488 830 aa29.78■■■□□ 2.36
TMEM260-202ENST00000538838 CWF19L2Q2TBE0 894 aaKnown RBP29.78■■■□□ 2.36
TMEM260-202ENST00000538838 IRX6P78412 446 aaPredicted RBP29.77■■■□□ 2.36
TMEM260-202ENST00000538838 HSP90AB3PQ58FF7 597 aa29.77■■■□□ 2.36
TMEM260-202ENST00000538838 CLEC4GQ6UXB4 293 aa29.77■■■□□ 2.36
TMEM260-202ENST00000538838 RGL2O15211 777 aa29.76■■■□□ 2.35
TMEM260-202ENST00000538838 GPTP24298 496 aa29.76■■■□□ 2.35
TMEM260-202ENST00000538838 FKBP8Q14318 412 aa29.76■■■□□ 2.35
TMEM260-202ENST00000538838 R3HDM1Q15032 1099 aaKnown RBP29.76■■■□□ 2.35
TMEM260-202ENST00000538838 INTS3Q68E01 1043 aaKnown RBP29.76■■■□□ 2.35
TMEM260-202ENST00000538838 CCT4P50991 539 aaKnown RBP29.75■■■□□ 2.35
TMEM260-202ENST00000538838 LINS1Q8NG48 757 aa29.75■■■□□ 2.35
TMEM260-202ENST00000538838 SRCIN1Q9C0H9 1055 aa29.75■■■□□ 2.35
TMEM260-202ENST00000538838 TBC1D9BQ66K14 1250 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 ITPRIPQ8IWB1 547 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 ISCA1Q9BUE6 129 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 COG6Q9Y2V7 657 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 UBN2Q6ZU65 1347 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 NEURL1BA8MQ27 555 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 SOCS7O14512 581 aa29.74■■■□□ 2.35
TMEM260-202ENST00000538838 ZNF34Q8IZ26 560 aa29.73■■■□□ 2.35
TMEM260-202ENST00000538838 NIP7Q9Y221 180 aaKnown RBP eCLIP29.73■■■□□ 2.35
TMEM260-202ENST00000538838 MVPQ14764 893 aaKnown RBP29.72■■■□□ 2.35
TMEM260-202ENST00000538838 BICDL1Q6ZP65 573 aa29.72■■■□□ 2.35
TMEM260-202ENST00000538838 PSDA5PKW4 1024 aaPredicted RBP29.71■■■□□ 2.35
TMEM260-202ENST00000538838 ALDH1L1O75891 902 aa29.71■■■□□ 2.35
TMEM260-202ENST00000538838 MSL1Q68DK7 614 aa29.71■■■□□ 2.35
TMEM260-202ENST00000538838 NLRP10Q86W26 655 aa29.7■■■□□ 2.34
TMEM260-202ENST00000538838 CRBNQ96SW2 442 aa29.7■■■□□ 2.34
TMEM260-202ENST00000538838 TRIM28Q13263 835 aaKnown RBP29.68■■■□□ 2.34
TMEM260-202ENST00000538838 NFIXQ14938 502 aa29.68■■■□□ 2.34
TMEM260-202ENST00000538838 CCDC191Q8NCU4 936 aa29.68■■■□□ 2.34
TMEM260-202ENST00000538838 CWC25Q9NXE8 425 aaPredicted RBP29.68■■■□□ 2.34
TMEM260-202ENST00000538838 GCKRQ14397 625 aa29.67■■■□□ 2.34
TMEM260-202ENST00000538838 FAM177BA6PVY3 158 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms