RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PDIA6Q15084 440 aa17.95■□□□□ 0.46
CD4-208ENST00000538827 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
CD4-208ENST00000538827 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
CD4-208ENST00000538827 F6X3S4 739 aa17.94■□□□□ 0.46
CD4-208ENST00000538827 CYP19A1P11511 503 aaPredicted RBP17.94■□□□□ 0.46
CD4-208ENST00000538827 KCNQ4P56696 695 aa17.94■□□□□ 0.46
CD4-208ENST00000538827 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
CD4-208ENST00000538827 TMEM57Q8N5G2 664 aa17.94■□□□□ 0.46
CD4-208ENST00000538827 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
CD4-208ENST00000538827 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
CD4-208ENST00000538827 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
CD4-208ENST00000538827 C4BP0C0L5 1744 aa17.93■□□□□ 0.46
CD4-208ENST00000538827 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
CD4-208ENST00000538827 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
CD4-208ENST00000538827 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
CD4-208ENST00000538827 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
CD4-208ENST00000538827 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
CD4-208ENST00000538827 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
CD4-208ENST00000538827 MVPQ14764 893 aaKnown RBP17.92■□□□□ 0.46
CD4-208ENST00000538827 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
CD4-208ENST00000538827 CCDC87Q9NVE4 849 aa17.92■□□□□ 0.46
CD4-208ENST00000538827 ADCY9O60503 1353 aa17.91■□□□□ 0.46
CD4-208ENST00000538827 COPS6Q7L5N1 327 aa17.91■□□□□ 0.46
CD4-208ENST00000538827 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
CD4-208ENST00000538827 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 GRIN3BO60391 1043 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 HSPA6P17066 643 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 KIF6Q6ZMV9 814 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 LRP10Q7Z4F1 713 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
CD4-208ENST00000538827 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
CD4-208ENST00000538827 CNTNAP4Q9C0A0 1308 aa17.88■□□□□ 0.45
CD4-208ENST00000538827 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
CD4-208ENST00000538827 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
CD4-208ENST00000538827 INTS5Q6P9B9 1019 aaKnown RBP17.87■□□□□ 0.45
CD4-208ENST00000538827 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
CD4-208ENST00000538827 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
CD4-208ENST00000538827 ZBTB3Q9H5J0 574 aa17.87■□□□□ 0.45
CD4-208ENST00000538827 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
CD4-208ENST00000538827 POLD1P28340 1107 aa17.86■□□□□ 0.45
CD4-208ENST00000538827 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
CD4-208ENST00000538827 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
CD4-208ENST00000538827 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
CD4-208ENST00000538827 COL15A1P39059 1388 aa17.86■□□□□ 0.45
CD4-208ENST00000538827 ATP10DQ9P241 1426 aa17.86■□□□□ 0.45
CD4-208ENST00000538827 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
CD4-208ENST00000538827 GOLGB1Q14789 3259 aaKnown RBP17.85■□□□□ 0.45
CD4-208ENST00000538827 SLC27A3Q5K4L6 730 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 UBR3Q6ZT12 1888 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 AK7Q96M32 723 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 MYD88Q99836 296 aa17.85■□□□□ 0.45
CD4-208ENST00000538827 NUP98P52948 1817 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 GNPATO15228 680 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 NEXNQ0ZGT2 675 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
CD4-208ENST00000538827 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 LRRC4BQ9NT99 713 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
CD4-208ENST00000538827 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CD4-208ENST00000538827 KLHL34Q8N239 644 aa17.82■□□□□ 0.44
CD4-208ENST00000538827 CHMP4BQ9H444 224 aaKnown RBP17.82■□□□□ 0.44
CD4-208ENST00000538827 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
CD4-208ENST00000538827 TBC1D2BQ9UPU7 963 aa17.82■□□□□ 0.44
CD4-208ENST00000538827 PHF14O94880 888 aa17.81■□□□□ 0.44
CD4-208ENST00000538827 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
CD4-208ENST00000538827 BEND3Q5T5X7 828 aa17.81■□□□□ 0.44
CD4-208ENST00000538827 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
CD4-208ENST00000538827 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
CD4-208ENST00000538827 A0A087WZG4 1122 aa17.8■□□□□ 0.44
CD4-208ENST00000538827 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
CD4-208ENST00000538827 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
CD4-208ENST00000538827 MEIS3Q99687 375 aa17.8■□□□□ 0.44
CD4-208ENST00000538827 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
CD4-208ENST00000538827 RTCBQ9Y3I0 505 aaKnown RBP17.8■□□□□ 0.44
CD4-208ENST00000538827 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
CD4-208ENST00000538827 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
CD4-208ENST00000538827 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
CD4-208ENST00000538827 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
CD4-208ENST00000538827 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
CD4-208ENST00000538827 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
CD4-208ENST00000538827 ALDH1L1O75891 902 aa17.78■□□□□ 0.44
CD4-208ENST00000538827 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
CD4-208ENST00000538827 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
CD4-208ENST00000538827 GNAI3P08754 354 aa17.76■□□□□ 0.43
CD4-208ENST00000538827 UBTFL1P0CB47 393 aaPredicted RBP17.76■□□□□ 0.43
CD4-208ENST00000538827 HMGB2P26583 209 aaKnown RBP17.76■□□□□ 0.43
CD4-208ENST00000538827 AAMPQ13685 434 aa17.76■□□□□ 0.43
CD4-208ENST00000538827 HLFQ16534 295 aa17.76■□□□□ 0.43
CD4-208ENST00000538827 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
CD4-208ENST00000538827 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
CD4-208ENST00000538827 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms