RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
CDK2AP1-204ENST00000538446 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
CDK2AP1-204ENST00000538446 GYS1P13807 737 aa16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 G2E3Q7L622 706 aa16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 MRPL50Q8N5N7 158 aaKnown RBP16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.2
CDK2AP1-204ENST00000538446 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 ZBTB7AO95365 584 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
CDK2AP1-204ENST00000538446 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
CDK2AP1-204ENST00000538446 FKBP8Q14318 412 aa16.25■□□□□ 0.19
CDK2AP1-204ENST00000538446 BCL2L12Q9HB09 334 aa16.25■□□□□ 0.19
CDK2AP1-204ENST00000538446 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
CDK2AP1-204ENST00000538446 PTPRCP08575 1304 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 BCAR3O75815 825 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 HLFQ16534 295 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
CDK2AP1-204ENST00000538446 PI4KAP2A4QPH2 592 aa16.23■□□□□ 0.19
CDK2AP1-204ENST00000538446 PI4KAP1Q8N8J0 262 aa16.23■□□□□ 0.19
CDK2AP1-204ENST00000538446 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
CDK2AP1-204ENST00000538446 MAP3K2Q9Y2U5 619 aa16.23■□□□□ 0.19
CDK2AP1-204ENST00000538446 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 BICDL1Q6ZP65 573 aa16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 ADCY9O60503 1353 aa16.22■□□□□ 0.19
CDK2AP1-204ENST00000538446 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 CASZ1Q86V15 1759 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 MMP10P09238 476 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 POLD1P28340 1107 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 TCIRG1Q13488 830 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 NFIXQ14938 502 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDK2AP1-204ENST00000538446 ARHGAP45Q92619 1136 aa16.2■□□□□ 0.18
CDK2AP1-204ENST00000538446 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
CDK2AP1-204ENST00000538446 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 F6X3S4 739 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 GPTP24298 496 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 TM4SF1P30408 202 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 MYD88Q99836 296 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
CDK2AP1-204ENST00000538446 PARP10Q53GL7 1025 aa16.18■□□□□ 0.18
CDK2AP1-204ENST00000538446 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
CDK2AP1-204ENST00000538446 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 NPHP1O15259 732 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 DDR1Q08345 913 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 ISCA1Q9BUE6 129 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 UBN2Q6ZU65 1347 aa16.17■□□□□ 0.18
CDK2AP1-204ENST00000538446 SERPINB2P05120 415 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 TRIM27P14373 513 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 PTGER2P43116 358 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
CDK2AP1-204ENST00000538446 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
CDK2AP1-204ENST00000538446 BEND3Q5T5X7 828 aa16.15■□□□□ 0.18
CDK2AP1-204ENST00000538446 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
CDK2AP1-204ENST00000538446 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
CDK2AP1-204ENST00000538446 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 NEURL1BA8MQ27 555 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 CWF19L2Q2TBE0 894 aaKnown RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 SUSD4Q5VX71 490 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 SRCIN1Q9C0H9 1055 aa16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
CDK2AP1-204ENST00000538446 ALDH1L1O75891 902 aa16.13■□□□□ 0.17
CDK2AP1-204ENST00000538446 MS4A1P11836 297 aa16.13■□□□□ 0.17
CDK2AP1-204ENST00000538446 CCT4P50991 539 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms