RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
TNFRSF1A-211ENST00000538363 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 F6X3S4 739 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 CRKLP46109 303 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
TNFRSF1A-211ENST00000538363 A0A087WZG4 1122 aa13.44□□□□□ -0.26
TNFRSF1A-211ENST00000538363 KCNQ4P56696 695 aa13.44□□□□□ -0.26
TNFRSF1A-211ENST00000538363 AK7Q96M32 723 aa13.44□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
TNFRSF1A-211ENST00000538363 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
TNFRSF1A-211ENST00000538363 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 RLBP1P12271 317 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 ITPK1Q13572 414 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 AAMPQ13685 434 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PDIA6Q15084 440 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 DZIP3Q86Y13 1208 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 MYD88Q99836 296 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-211ENST00000538363 GNPATO15228 680 aa13.41□□□□□ -0.26
TNFRSF1A-211ENST00000538363 BAG6P46379 1132 aa13.41□□□□□ -0.26
TNFRSF1A-211ENST00000538363 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
TNFRSF1A-211ENST00000538363 ABCC4O15439 1325 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 ZPR1O75312 459 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 GNAI3P08754 354 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 LINC00116Q8NCU8 138 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
TNFRSF1A-211ENST00000538363 PLSCR1O15162 318 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ALDH1L1O75891 902 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 PHF14O94880 888 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 METTL22Q9BUU2 404 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 RFC4P35249 363 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 MAP3K15Q6ZN16 1313 aa13.38□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
TNFRSF1A-211ENST00000538363 NPHP1O15259 732 aa13.37□□□□□ -0.27
TNFRSF1A-211ENST00000538363 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
TNFRSF1A-211ENST00000538363 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-211ENST00000538363 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
TNFRSF1A-211ENST00000538363 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ADCY9O60503 1353 aa13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 GNAI2P04899 355 aa13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ERVV-1B6SEH8 477 aa13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 ZBTB7BO15156 539 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 CWF19L2Q2TBE0 894 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 CWC25Q9NXE8 425 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
TNFRSF1A-211ENST00000538363 COL15A1P39059 1388 aa13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 GPTP24298 496 aa13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 GTF2E1P29083 439 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 EZH2Q15910 746 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 C1orf115Q9H7X2 142 aa13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 LRRC4BQ9NT99 713 aa13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 PXDNLA1KZ92 1463 aa13.34□□□□□ -0.27
TNFRSF1A-211ENST00000538363 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
TNFRSF1A-211ENST00000538363 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms