RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
PRKAB1-204ENST00000538271 C7P10643 843 aa13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 MS4A3Q96HJ5 214 aa13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 KDRP35968 1356 aa13.8□□□□□ -0.2
PRKAB1-204ENST00000538271 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 HOXC9P31274 260 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
PRKAB1-204ENST00000538271 H0YIN7 160 aa13.78□□□□□ -0.2
PRKAB1-204ENST00000538271 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
PRKAB1-204ENST00000538271 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
PRKAB1-204ENST00000538271 ZNF831Q5JPB2 1677 aa13.78□□□□□ -0.2
PRKAB1-204ENST00000538271 NRXN2Q9P2S2 1712 aa13.78□□□□□ -0.2
PRKAB1-204ENST00000538271 POTEMA6NI47 508 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 TRAF5O00463 557 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 RGL2O15211 777 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 INSRP06213 1382 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 ZIC5Q96T25 663 aa13.77□□□□□ -0.21
PRKAB1-204ENST00000538271 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
PRKAB1-204ENST00000538271 GSE1Q14687 1217 aa13.76□□□□□ -0.21
PRKAB1-204ENST00000538271 SAGE1Q9NXZ1 904 aa13.75□□□□□ -0.21
PRKAB1-204ENST00000538271 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
PRKAB1-204ENST00000538271 AMPHP49418 695 aa13.74□□□□□ -0.21
PRKAB1-204ENST00000538271 NOGQ13253 232 aa13.74□□□□□ -0.21
PRKAB1-204ENST00000538271 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRKAB1-204ENST00000538271 CEP290O15078 2479 aa13.73□□□□□ -0.21
PRKAB1-204ENST00000538271 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
PRKAB1-204ENST00000538271 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
PRKAB1-204ENST00000538271 PKN2Q16513 984 aaKnown RBP13.72□□□□□ -0.21
PRKAB1-204ENST00000538271 AKAP11Q9UKA4 1901 aa13.71□□□□□ -0.21
PRKAB1-204ENST00000538271 PLCB2Q00722 1185 aa13.71□□□□□ -0.21
PRKAB1-204ENST00000538271 NFIXQ14938 502 aa13.71□□□□□ -0.21
PRKAB1-204ENST00000538271 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
PRKAB1-204ENST00000538271 SLX4Q8IY92 1834 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 TRPA1O75762 1119 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 SERPINB2P05120 415 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
PRKAB1-204ENST00000538271 SCN11AQ9UI33 1791 aa13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 FBLN1P23142 703 aa13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 RNF186Q9NXI6 227 aa13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 ANKRD31Q8N7Z5 1873 aa13.69□□□□□ -0.22
PRKAB1-204ENST00000538271 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
PRKAB1-204ENST00000538271 COL11A2P13942 1736 aaPredicted RBP13.68□□□□□ -0.22
PRKAB1-204ENST00000538271 ZPR1O75312 459 aa13.68□□□□□ -0.22
PRKAB1-204ENST00000538271 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
PRKAB1-204ENST00000538271 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
PRKAB1-204ENST00000538271 GPC2Q8N158 579 aa13.67□□□□□ -0.22
PRKAB1-204ENST00000538271 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
PRKAB1-204ENST00000538271 SCUBE2Q9NQ36 999 aa13.67□□□□□ -0.22
PRKAB1-204ENST00000538271 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
PRKAB1-204ENST00000538271 MPNDQ8N594 471 aa13.66□□□□□ -0.22
PRKAB1-204ENST00000538271 COL25A1Q9BXS0 654 aaPredicted RBP13.66□□□□□ -0.22
PRKAB1-204ENST00000538271 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
PRKAB1-204ENST00000538271 FZD9O00144 591 aa13.65□□□□□ -0.22
PRKAB1-204ENST00000538271 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
PRKAB1-204ENST00000538271 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
PRKAB1-204ENST00000538271 RTL1A6NKG5 1358 aa13.65□□□□□ -0.22
PRKAB1-204ENST00000538271 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 LMOD1P29536 600 aaPredicted RBP13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 EPS15P42566 896 aa13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 ZNF277Q9NRM2 450 aaPredicted RBP13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
PRKAB1-204ENST00000538271 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 FAM155AB1AL88 458 aaPredicted RBP13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 PDE6BP35913 854 aa13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 RANBP2P49792 3224 aaKnown RBP13.63□□□□□ -0.23
PRKAB1-204ENST00000538271 FBXO46Q6PJ61 603 aaPredicted RBP13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 ZNF408Q9H9D4 720 aa13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 UNC80Q8N2C7 3258 aa13.62□□□□□ -0.23
PRKAB1-204ENST00000538271 SCNN1DP51172 638 aa13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 HUNKP57058 714 aa13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 BCL2L12Q9HB09 334 aa13.61□□□□□ -0.23
PRKAB1-204ENST00000538271 BRCA2P51587 3418 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms