RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PHACTR3Q96KR7 559 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 ATP10DQ9P241 1426 aa4.5□□□□□ -1.69
PTPN22-211ENST00000538253 CARMIL3Q8ND23 1372 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 CHRM1P11229 460 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 CYP19A1P11511 503 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 ALDH1B1P30837 517 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 MMP14P50281 582 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 TRIM28Q13263 835 aaKnown RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 TMED8Q6PL24 325 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 TEX2Q8IWB9 1127 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 DNAJC10Q8IXB1 793 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 AKT1S1Q96B36 256 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 ZNF496Q96IT1 587 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 COL15A1P39059 1388 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 GNAI3P08754 354 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 BRPF1P55201 1214 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 LGR6Q9HBX8 967 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 MAP3K15Q6ZN16 1313 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 C5P01031 1676 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 EIF5P55010 431 aaKnown RBP4.49□□□□□ -1.69
PTPN22-211ENST00000538253 CCDC191Q8NCU4 936 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 VPS33BQ9H267 617 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 KCNG1Q9UIX4 513 aa4.49□□□□□ -1.69
PTPN22-211ENST00000538253 RIC1Q4ADV7 1423 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 HMMRO75330 724 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 SLFN5Q08AF3 891 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 HSP90AB4PQ58FF6 505 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 ANKRD13DQ6ZTN6 518 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 ZNF592Q92610 1267 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 UTP14AQ9BVJ6 771 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 CICQ96RK0 1608 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 H0YIN7 160 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 NCLP19338 710 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 EIF2S2P20042 333 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 KSR2Q6VAB6 950 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 GIGYF2Q6Y7W6 1299 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 NBPF5PQ86XG9 351 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 FTSJ3Q8IY81 847 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 CNBD1Q8NA66 436 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 RBM17Q96I25 401 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 NLRP3Q96P20 1036 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 CDC5LQ99459 802 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 MBIPQ9NS73 344 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 SMC4Q9NTJ3 1288 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 TRIM35Q9UPQ4 493 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 RRP7AQ9Y3A4 280 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 USP42Q9H9J4 1324 aaKnown RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 ADAMTS7Q9UKP4 1686 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 ZKSCAN2Q63HK3 967 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 LINS1Q8NG48 757 aa4.48□□□□□ -1.69
PTPN22-211ENST00000538253 CWC25Q9NXE8 425 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 ZNF330Q9Y3S2 320 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-211ENST00000538253 FKBP5Q13451 457 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 DEFB132Q7Z7B7 95 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 TICAM2Q86XR7 235 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 MIER1Q8N108 512 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 RPGRQ92834 1020 aaKnown RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 BRIP1Q9BX63 1249 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 SRCIN1Q9C0H9 1055 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 SH3TC1Q8TE82 1336 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 FANCIQ9NVI1 1328 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 ZC3H4Q9UPT8 1303 aaKnown RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 TCIRG1Q13488 830 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 R3HDM1Q15032 1099 aaKnown RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 CCDC152Q4G0S7 254 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 STYK1Q6J9G0 422 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 DNAAF4Q8WXU2 420 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 EYA3Q99504 573 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 SCN11AQ9UI33 1791 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 NPR1P16066 1061 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 SLC39A6Q13433 755 aa4.47□□□□□ -1.69
PTPN22-211ENST00000538253 DDX46Q7L014 1031 aaKnown RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 C9orf78Q9NZ63 289 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-211ENST00000538253 PXDNLA1KZ92 1463 aa4.46□□□□□ -1.69
PTPN22-211ENST00000538253 DOT1LQ8TEK3 1739 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 RGPD5Q99666 1765 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 BBOX1O75936 387 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 LINC00116Q8NCU8 138 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 ARHGEF1Q92888 912 aaKnown RBP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 METTL22Q9BUU2 404 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 ANKRD2Q9GZV1 360 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 NIP7Q9Y221 180 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 SUPT16HQ9Y5B9 1047 aaKnown RBP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 PCCAP05165 728 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 EXOSC9Q06265 439 aaKnown RBP4.46□□□□□ -1.7
PTPN22-211ENST00000538253 RTKN2Q8IZC4 609 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 PIM2Q9P1W9 311 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 ZBTB1Q9Y2K1 713 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 CDHR2Q9BYE9 1310 aa4.46□□□□□ -1.7
PTPN22-211ENST00000538253 SLC4A2P04920 1241 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 SERPINB2P05120 415 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 FLIIQ13045 1269 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 PDE3AQ14432 1141 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 ERC1Q8IUD2 1116 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 XAGE3Q8WTP9 111 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 MASTLQ96GX5 879 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms