RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 ZSCAN23Q3MJ62 389 aa13.34□□□□□ -0.27
LRIT2-202ENST00000538192 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
LRIT2-202ENST00000538192 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.27
LRIT2-202ENST00000538192 SYCE3A1L190 88 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 OFD1O75665 1012 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 IPO4Q8TEX9 1081 aaKnown RBP13.33□□□□□ -0.28
LRIT2-202ENST00000538192 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 ZBTB22O15209 634 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 PTMSP20962 102 aa13.33□□□□□ -0.28
LRIT2-202ENST00000538192 DMTNQ08495 405 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 POLA2Q14181 598 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 CYP2E1P05181 493 aaPredicted RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 KSR2Q6VAB6 950 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 BICC1Q9H694 974 aaKnown RBP13.32□□□□□ -0.28
LRIT2-202ENST00000538192 NDUFB9Q9Y6M9 179 aa13.32□□□□□ -0.28
LRIT2-202ENST00000538192 LTN1O94822 1766 aa13.31□□□□□ -0.28
LRIT2-202ENST00000538192 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
LRIT2-202ENST00000538192 TMEM51Q9NW97 253 aa13.31□□□□□ -0.28
LRIT2-202ENST00000538192 XRN1Q8IZH2 1706 aaKnown RBP13.31□□□□□ -0.28
LRIT2-202ENST00000538192 G3BP1Q13283 466 aaKnown RBP eCLIP13.31□□□□□ -0.28
LRIT2-202ENST00000538192 MYD88Q99836 296 aa13.31□□□□□ -0.28
LRIT2-202ENST00000538192 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
LRIT2-202ENST00000538192 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 SGSM2O43147 1006 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 PTH1RQ03431 593 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 MPNDQ8N594 471 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 TMEM63CQ9P1W3 806 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 SNX14Q9Y5W7 946 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 FAM208AQ9UK61 1670 aaKnown RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 IGSF3O75054 1194 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 ZSCAN20P17040 1043 aaPredicted RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 CBX1P83916 185 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 ZSCAN30Q86W11 494 aa13.3□□□□□ -0.28
LRIT2-202ENST00000538192 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 ZNF330Q9Y3S2 320 aaPredicted RBP13.3□□□□□ -0.28
LRIT2-202ENST00000538192 GRM8O00222 908 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 GLRX3O76003 335 aaKnown RBP13.29□□□□□ -0.28
LRIT2-202ENST00000538192 HSPA4P34932 840 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 AK2P54819 239 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
LRIT2-202ENST00000538192 RBSNQ9H1K0 784 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
LRIT2-202ENST00000538192 ATF3P18847 181 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
LRIT2-202ENST00000538192 MCM2P49736 904 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 NEXNQ0ZGT2 675 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
LRIT2-202ENST00000538192 GADD45BO75293 160 aaPredicted RBP13.28□□□□□ -0.28
LRIT2-202ENST00000538192 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
LRIT2-202ENST00000538192 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
LRIT2-202ENST00000538192 RAD50Q92878 1312 aa13.27□□□□□ -0.28
LRIT2-202ENST00000538192 HOXB7P09629 217 aa13.27□□□□□ -0.28
LRIT2-202ENST00000538192 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.28
LRIT2-202ENST00000538192 ANAPC15P60006 121 aa13.27□□□□□ -0.28
LRIT2-202ENST00000538192 LSG1Q9H089 658 aaKnown RBP13.27□□□□□ -0.28
LRIT2-202ENST00000538192 HYPKQ9NX55 129 aa13.27□□□□□ -0.28
LRIT2-202ENST00000538192 ERBB3P21860 1342 aa13.27□□□□□ -0.29
LRIT2-202ENST00000538192 LARGE1O95461 756 aa13.27□□□□□ -0.29
LRIT2-202ENST00000538192 NECAB1Q8N987 351 aa13.27□□□□□ -0.29
LRIT2-202ENST00000538192 MARF1Q9Y4F3 1742 aaKnown RBP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 FIBPO43427 364 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 BRD1O95696 1058 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 UBE3BQ7Z3V4 1068 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 KAZALD1Q96I82 304 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 DDX21Q9NR30 783 aaKnown RBP eCLIP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 NFAT5O94916 1531 aa13.26□□□□□ -0.29
LRIT2-202ENST00000538192 VPS37CA5D8V6 355 aaPredicted RBP13.26□□□□□ -0.29
LRIT2-202ENST00000538192 SASH1O94885 1247 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms