RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
SRGAP1-203ENST00000537585 LARGE2Q8N3Y3 721 aa9.23□□□□□ -0.93
SRGAP1-203ENST00000537585 ZNF280CQ8ND82 737 aa9.23□□□□□ -0.93
SRGAP1-203ENST00000537585 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 RASA1P20936 1047 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 SFSWAPQ12872 951 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 SAMD5Q5TGI4 173 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 PODNQ7Z5L7 613 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 PPP1R12CQ9BZL4 782 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
SRGAP1-203ENST00000537585 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 AMPD1P23109 780 aa9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 SLC30A3Q99726 388 aa9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 PHACTR1Q9C0D0 580 aa9.21□□□□□ -0.94
SRGAP1-203ENST00000537585 A6NJR5 290 aa9.2□□□□□ -0.94
SRGAP1-203ENST00000537585 DGKGP49619 791 aa9.2□□□□□ -0.94
SRGAP1-203ENST00000537585 PSMA6P60900 246 aaKnown RBP9.2□□□□□ -0.94
SRGAP1-203ENST00000537585 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
SRGAP1-203ENST00000537585 RHPN1Q8TCX5 695 aa9.2□□□□□ -0.94
SRGAP1-203ENST00000537585 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 PROCP04070 461 aa9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 PTK7Q13308 1070 aa9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 ZNF468Q5VIY5 522 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 CHSY3Q70JA7 882 aa9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 MARK1Q9P0L2 795 aa9.19□□□□□ -0.94
SRGAP1-203ENST00000537585 ADH6P28332 368 aa9.18□□□□□ -0.94
SRGAP1-203ENST00000537585 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
SRGAP1-203ENST00000537585 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
SRGAP1-203ENST00000537585 M0R2N6 131 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 DPYDQ12882 1025 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 CFAP70Q5T0N1 1121 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 NGLY1Q96IV0 654 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 MDFIQ99750 246 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
SRGAP1-203ENST00000537585 LOC100996750A0A140TA64 210 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L21D6R901 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 LMOD1P29536 600 aaPredicted RBP9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 SUSD3Q96L08 255 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 KRTAP4-6Q9BYQ5 205 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
SRGAP1-203ENST00000537585 SEC13P55735 322 aa9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 TYRO3Q06418 890 aa9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 ALDH16A1Q8IZ83 802 aa9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 ARXQ96QS3 562 aa9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
SRGAP1-203ENST00000537585 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
SRGAP1-203ENST00000537585 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
SRGAP1-203ENST00000537585 C1orf53Q5VUE5 145 aa9.13□□□□□ -0.95
SRGAP1-203ENST00000537585 C8orf86Q6ZUL3 223 aa9.13□□□□□ -0.95
SRGAP1-203ENST00000537585 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
SRGAP1-203ENST00000537585 BRD7Q9NPI1 651 aa9.13□□□□□ -0.95
SRGAP1-203ENST00000537585 BCS1LQ9Y276 419 aa9.13□□□□□ -0.95
SRGAP1-203ENST00000537585 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 SPEM2Q0P670 501 aa9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 AVENQ9NQS1 362 aaPredicted RBP9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
SRGAP1-203ENST00000537585 GNB5O14775 395 aa9.11□□□□□ -0.95
SRGAP1-203ENST00000537585 MSTNO14793 375 aa9.11□□□□□ -0.95
SRGAP1-203ENST00000537585 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
SRGAP1-203ENST00000537585 NEUROD4Q9HD90 331 aa9.11□□□□□ -0.95
SRGAP1-203ENST00000537585 GPC6Q9Y625 555 aaPredicted RBP9.11□□□□□ -0.95
SRGAP1-203ENST00000537585 IGHA1P01876 353 aa9.1□□□□□ -0.95
SRGAP1-203ENST00000537585 CHRNA4P43681 627 aa9.1□□□□□ -0.95
SRGAP1-203ENST00000537585 ELOA3CA0A087WX78 387 aaPredicted RBP9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 ELOA3DA6NLF2 546 aaPredicted RBP9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 FAM196BA6NMK8 535 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 ELOA3BQ3SY89 546 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 ELOA3Q8NG57 546 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 VRTNQ9H8Y1 702 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 KLK14Q9P0G3 267 aa9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
SRGAP1-203ENST00000537585 ALBP02768 609 aa9.08□□□□□ -0.96
SRGAP1-203ENST00000537585 RFX1P22670 979 aa9.08□□□□□ -0.96
SRGAP1-203ENST00000537585 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms