RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 EPB41L2O43491 1005 aaKnown RBP19.11■□□□□ 0.65
MKS1-204ENST00000537529 CNTROBQ8N137 903 aa19.11■□□□□ 0.65
MKS1-204ENST00000537529 CARD10Q9BWT7 1032 aa19.11■□□□□ 0.65
MKS1-204ENST00000537529 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
MKS1-204ENST00000537529 GLI3P10071 1580 aa19.11■□□□□ 0.65
MKS1-204ENST00000537529 RAB3GAP1Q15042 981 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 LRP10Q7Z4F1 713 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 GPATCH3Q96I76 525 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 MYD88Q99836 296 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
MKS1-204ENST00000537529 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 ANKRD13DQ6ZTN6 518 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
MKS1-204ENST00000537529 ERBB4Q15303 1308 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 GLRX3O76003 335 aaKnown RBP19.09■□□□□ 0.65
MKS1-204ENST00000537529 IL2RBP14784 551 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 ANAPC15P60006 121 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 GCKRQ14397 625 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 KAZALD1Q96I82 304 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 GBP4Q96PP9 640 aa19.09■□□□□ 0.65
MKS1-204ENST00000537529 TNPO1Q92973 898 aaKnown RBP19.08■□□□□ 0.64
MKS1-204ENST00000537529 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
MKS1-204ENST00000537529 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
MKS1-204ENST00000537529 G3BP1Q13283 466 aaKnown RBP eCLIP19.07■□□□□ 0.64
MKS1-204ENST00000537529 NKX1-1Q15270 411 aaPredicted RBP19.07■□□□□ 0.64
MKS1-204ENST00000537529 ECHDC1Q9NTX5 307 aa19.07■□□□□ 0.64
MKS1-204ENST00000537529 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
MKS1-204ENST00000537529 EVA1CP58658 441 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 PAPPAQ13219 1627 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 PTMSP20962 102 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 MCM2P49736 904 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 IL17RAQ96F46 866 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 COL15A1P39059 1388 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 AK9Q5TCS8 1911 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
MKS1-204ENST00000537529 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
MKS1-204ENST00000537529 AACSQ86V21 672 aa19.04■□□□□ 0.64
MKS1-204ENST00000537529 CWC22Q9HCG8 908 aaKnown RBP19.04■□□□□ 0.64
MKS1-204ENST00000537529 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
MKS1-204ENST00000537529 SGSM2O43147 1006 aa19.04■□□□□ 0.64
MKS1-204ENST00000537529 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
MKS1-204ENST00000537529 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
MKS1-204ENST00000537529 NEK4P51957 841 aa19.03■□□□□ 0.64
MKS1-204ENST00000537529 TRAK2O60296 914 aa19.02■□□□□ 0.64
MKS1-204ENST00000537529 SHANK3Q9BYB0 1731 aa19.02■□□□□ 0.64
MKS1-204ENST00000537529 SASH1O94885 1247 aa19.02■□□□□ 0.63
MKS1-204ENST00000537529 NUCB2P80303 420 aa19.02■□□□□ 0.63
MKS1-204ENST00000537529 DDX54Q8TDD1 881 aaKnown RBP19.02■□□□□ 0.63
MKS1-204ENST00000537529 PALD1Q9ULE6 856 aa19.02■□□□□ 0.63
MKS1-204ENST00000537529 RAD50Q92878 1312 aa19.02■□□□□ 0.63
MKS1-204ENST00000537529 TNS2Q63HR2 1409 aa19.01■□□□□ 0.63
MKS1-204ENST00000537529 RUFY2Q8WXA3 655 aa19.01■□□□□ 0.63
MKS1-204ENST00000537529 DIAPH3Q9NSV4 1193 aa19.01■□□□□ 0.63
MKS1-204ENST00000537529 AFDNP55196 1824 aaKnown RBP19.01■□□□□ 0.63
MKS1-204ENST00000537529 HSPA4P34932 840 aa19.01■□□□□ 0.63
MKS1-204ENST00000537529 EPHA10Q5JZY3 1008 aa19.01■□□□□ 0.63
MKS1-204ENST00000537529 SSFA2P28290 1259 aa19■□□□□ 0.63
MKS1-204ENST00000537529 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
MKS1-204ENST00000537529 UBE3BQ7Z3V4 1068 aa19■□□□□ 0.63
MKS1-204ENST00000537529 EVI5LQ96CN4 794 aa19■□□□□ 0.63
MKS1-204ENST00000537529 IL25Q9H293 177 aa19■□□□□ 0.63
MKS1-204ENST00000537529 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 NBPF14Q5TI25 921 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
MKS1-204ENST00000537529 CLEC17AQ6ZS10 378 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 SIL1Q9H173 461 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 A0A087WZG4 1122 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 RABL6Q3YEC7 729 aaPredicted RBP18.99■□□□□ 0.63
MKS1-204ENST00000537529 EAF2Q96CJ1 260 aaPredicted RBP18.99■□□□□ 0.63
MKS1-204ENST00000537529 COPRSQ9NQ92 184 aa18.99■□□□□ 0.63
MKS1-204ENST00000537529 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
MKS1-204ENST00000537529 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
MKS1-204ENST00000537529 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
MKS1-204ENST00000537529 GOLGA6L22H0YM25 854 aa18.97■□□□□ 0.63
MKS1-204ENST00000537529 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
MKS1-204ENST00000537529 HIP1O00291 1037 aa18.97■□□□□ 0.63
MKS1-204ENST00000537529 SKOR2Q2VWA4 1001 aaPredicted RBP18.97■□□□□ 0.63
MKS1-204ENST00000537529 TMX3Q96JJ7 454 aa18.97■□□□□ 0.63
MKS1-204ENST00000537529 RFX5P48382 616 aaPredicted RBP18.96■□□□□ 0.63
MKS1-204ENST00000537529 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
MKS1-204ENST00000537529 TMOD3Q9NYL9 352 aa18.96■□□□□ 0.63
MKS1-204ENST00000537529 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
MKS1-204ENST00000537529 CYP2E1P05181 493 aaPredicted RBP18.96■□□□□ 0.63
MKS1-204ENST00000537529 CASP7P55210 303 aa18.96■□□□□ 0.63
MKS1-204ENST00000537529 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
MKS1-204ENST00000537529 KLHDC4Q8TBB5 520 aa18.96■□□□□ 0.63
MKS1-204ENST00000537529 TOGARAM1Q9Y4F4 1720 aa18.95■□□□□ 0.62
MKS1-204ENST00000537529 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
MKS1-204ENST00000537529 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
MKS1-204ENST00000537529 CWC25Q9NXE8 425 aaPredicted RBP18.95■□□□□ 0.62
MKS1-204ENST00000537529 A1BGP04217 495 aa18.94■□□□□ 0.62
MKS1-204ENST00000537529 TTLL7Q6ZT98 887 aa18.94■□□□□ 0.62
MKS1-204ENST00000537529 TLR7Q9NYK1 1049 aaKnown RBP18.94■□□□□ 0.62
MKS1-204ENST00000537529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
MKS1-204ENST00000537529 H7C1W4 665 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms