RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.35
USP44-203ENST00000537435 HS1BP3Q53T59 392 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 PHRF1Q9P1Y6 1649 aaKnown RBP17.26■□□□□ 0.35
USP44-203ENST00000537435 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 GADD45BO75293 160 aaPredicted RBP17.26■□□□□ 0.35
USP44-203ENST00000537435 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
USP44-203ENST00000537435 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
USP44-203ENST00000537435 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
USP44-203ENST00000537435 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 CPA1P15085 419 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 CASTP20810 708 aaKnown RBP17.25■□□□□ 0.35
USP44-203ENST00000537435 PTH1RQ03431 593 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 RNF214Q8ND24 703 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
USP44-203ENST00000537435 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 AACSQ86V21 672 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 TSPY26PQ9H489 355 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
USP44-203ENST00000537435 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
USP44-203ENST00000537435 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
USP44-203ENST00000537435 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
USP44-203ENST00000537435 GRM8O00222 908 aa17.23■□□□□ 0.35
USP44-203ENST00000537435 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
USP44-203ENST00000537435 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
USP44-203ENST00000537435 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
USP44-203ENST00000537435 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
USP44-203ENST00000537435 STX6O43752 255 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 LARGE1O95461 756 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 SYT1P21579 422 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
USP44-203ENST00000537435 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 SLIT3O75094 1523 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
USP44-203ENST00000537435 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
USP44-203ENST00000537435 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
USP44-203ENST00000537435 BICC1Q9H694 974 aaKnown RBP17.21■□□□□ 0.35
USP44-203ENST00000537435 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
USP44-203ENST00000537435 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
USP44-203ENST00000537435 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
USP44-203ENST00000537435 PHF14O94880 888 aa17.21■□□□□ 0.34
USP44-203ENST00000537435 SASH1O94885 1247 aa17.21■□□□□ 0.34
USP44-203ENST00000537435 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.34
USP44-203ENST00000537435 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.21■□□□□ 0.34
USP44-203ENST00000537435 UTYO14607 1347 aa17.2■□□□□ 0.34
USP44-203ENST00000537435 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP44-203ENST00000537435 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
USP44-203ENST00000537435 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
USP44-203ENST00000537435 KCNB2Q92953 911 aa17.2■□□□□ 0.34
USP44-203ENST00000537435 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
USP44-203ENST00000537435 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
USP44-203ENST00000537435 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 OFD1O75665 1012 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 F13A1P00488 732 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 PDIA6Q15084 440 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 NECTIN1Q15223 517 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
USP44-203ENST00000537435 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
USP44-203ENST00000537435 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 RBM8AQ9Y5S9 174 aaKnown RBP17.18■□□□□ 0.34
USP44-203ENST00000537435 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 GJB2P29033 226 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 KRT28Q7Z3Y7 464 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 DDX54Q8TDD1 881 aaKnown RBP17.18■□□□□ 0.34
USP44-203ENST00000537435 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
USP44-203ENST00000537435 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 DTNBO60941 627 aa17.17■□□□□ 0.34
USP44-203ENST00000537435 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
USP44-203ENST00000537435 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 SIL1Q9H173 461 aa17.17■□□□□ 0.34
USP44-203ENST00000537435 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
USP44-203ENST00000537435 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
USP44-203ENST00000537435 HIP1O00291 1037 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 CCDC183Q5T5S1 534 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 ERBB3P21860 1342 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 FIBPO43427 364 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 KCNJ4P48050 445 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 UBE2HP62256 183 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
USP44-203ENST00000537435 TPM2P07951 284 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 MYL6BP14649 208 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms