RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 PHF14O94880 888 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 GNAI2P04899 355 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 TRIM29Q14134 588 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 ORAI2Q96SN7 254 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 C22orf23Q9BZE7 217 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 VIRMAQ69YN4 1812 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 C11orf95C9JLR9 678 aaPredicted RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 CCDC27Q2M243 656 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 ATF7IPQ6VMQ6 1270 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 KIF6Q6ZMV9 814 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 RALYLQ86SE5 291 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 KCNH5Q8NCM2 988 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 ZNF428Q96B54 188 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 SRCIN1Q9C0H9 1055 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 NSD3Q9BZ95 1437 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 SBNO2Q9Y2G9 1366 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 ADAMTS7Q9UKP4 1686 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 NPHP3Q7Z494 1330 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 TMPOP42166 694 aaKnown RBP4.91□□□□□ -1.62
SEC23A-202ENST00000537403 NFXL1Q6ZNB6 911 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 CCDC125Q86Z20 511 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 FSD1Q9BTV5 496 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 COL5A2P05997 1499 aaPredicted RBP4.91□□□□□ -1.62
SEC23A-202ENST00000537403 NCAPD2Q15021 1401 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 ERICH2A1L162 156 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 VPS37CA5D8V6 355 aaPredicted RBP4.91□□□□□ -1.62
SEC23A-202ENST00000537403 CDC45O75419 566 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 MYL6BP14649 208 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 PDZRN3Q9UPQ7 1066 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 BECN2A8MW95 431 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 CT47B1P0C2W7 299 aaPredicted RBP4.91□□□□□ -1.62
SEC23A-202ENST00000537403 RXRBP28702 533 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 VPS72Q15906 364 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 NFE2L2Q16236 605 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 NME9Q86XW9 330 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 THUMPD2Q9BTF0 503 aaKnown RBP4.91□□□□□ -1.62
SEC23A-202ENST00000537403 CHMP5Q9NZZ3 219 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 SMC3Q9UQE7 1217 aa4.91□□□□□ -1.62
SEC23A-202ENST00000537403 COL5A3P25940 1745 aaPredicted RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 WASLO00401 505 aaPredicted RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 PES1O00541 588 aaKnown RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 FYB1O15117 783 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 CCT4P50991 539 aaKnown RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 CNTROBQ8N137 903 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 CTDP1Q9Y5B0 961 aaPredicted RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 BTBD11A6QL63 1104 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 WWC1Q8IX03 1113 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 FBXO22Q8NEZ5 403 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 DDX17Q92841 729 aaKnown RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 GCC1Q96CN9 775 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 CNNM1Q9NRU3 951 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 TBC1D2BQ9UPU7 963 aa4.9□□□□□ -1.62
SEC23A-202ENST00000537403 BRCA1P38398 1863 aaKnown RBP4.9□□□□□ -1.62
SEC23A-202ENST00000537403 DOT1LQ8TEK3 1739 aa4.9□□□□□ -1.63
SEC23A-202ENST00000537403 GOLGA6L19H0YKK7 550 aa4.9□□□□□ -1.63
SEC23A-202ENST00000537403 TPD52L1Q16890 204 aaPredicted RBP4.9□□□□□ -1.63
SEC23A-202ENST00000537403 DNAJC2Q99543 621 aaKnown RBP4.9□□□□□ -1.63
SEC23A-202ENST00000537403 C5P01031 1676 aa4.9□□□□□ -1.63
SEC23A-202ENST00000537403 PTCD1O75127 700 aaKnown RBP4.89□□□□□ -1.63
SEC23A-202ENST00000537403 DCTN1Q14203 1278 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SKOR2Q2VWA4 1001 aaPredicted RBP4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SIL1Q9H173 461 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 MIS18AQ9NYP9 233 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 NUCB2P80303 420 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 MCM10Q7L590 875 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 ERC1Q8IUD2 1116 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 BICD2Q8TD16 824 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 EMILIN1Q9Y6C2 1016 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 MVPQ14764 893 aaKnown RBP4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SAFBQ15424 915 aaKnown RBP eCLIP4.89□□□□□ -1.63
SEC23A-202ENST00000537403 PARD3Q8TEW0 1356 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SRGAP3O43295 1099 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 NEK4P51957 841 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SLFN5Q08AF3 891 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 SF3B2Q13435 895 aaKnown RBP4.89□□□□□ -1.63
SEC23A-202ENST00000537403 MPHOSPH8Q99549 860 aa4.89□□□□□ -1.63
SEC23A-202ENST00000537403 ITGB4P16144 1822 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 PRKCSHP14314 528 aaPredicted RBP4.88□□□□□ -1.63
SEC23A-202ENST00000537403 FOSBP53539 338 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC57Q2TAC2 916 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC158Q5M9N0 1113 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 USHBP1Q8N6Y0 703 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 GJD4Q96KN9 370 aaPredicted RBP4.88□□□□□ -1.63
SEC23A-202ENST00000537403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.88□□□□□ -1.636e-10■□□□□ 10.8
SEC23A-202ENST00000537403 TRPC5Q9UL62 973 aaPredicted RBP4.88□□□□□ -1.63
SEC23A-202ENST00000537403 MTMR7Q9Y216 660 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 NINLQ9Y2I6 1382 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 ADAMTS2O95450 1211 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 PSMA5P28066 241 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 DUSP27Q5VZP5 1158 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 UNC5CLQ8IV45 518 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 LRRCC1Q9C099 1032 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 CEP126Q9P2H0 1117 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 TCEAL9Q9UHQ7 104 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 SPATA31A5Q5VU36 1347 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 SPATA31A7Q8IWB4 1347 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 POTEFA5A3E0 1075 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 PPP1R1BQ9UD71 204 aaPredicted RBP4.88□□□□□ -1.63
SEC23A-202ENST00000537403 USP6P35125 1406 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms