RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
TNC-211ENST00000537320 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
TNC-211ENST00000537320 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 KDM6BO15054 1643 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 LTKP29376 864 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 EPS15P42566 896 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
TNC-211ENST00000537320 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 SBNO1A3KN83 1393 aa13.38□□□□□ -0.27
TNC-211ENST00000537320 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 CEP85Q6P2H3 762 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 MPNDQ8N594 471 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 DDB1Q16531 1140 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 AK7Q96M32 723 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 PA2G4Q9UQ80 394 aaKnown RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 NAP1L1P55209 391 aaKnown RBP13.37□□□□□ -0.27
TNC-211ENST00000537320 MKNK2Q9HBH9 465 aa13.37□□□□□ -0.27
TNC-211ENST00000537320 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 SPATA31E1Q6ZUB1 1445 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 CCDC82Q8N4S0 544 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
TNC-211ENST00000537320 OFD1O75665 1012 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
TNC-211ENST00000537320 GUCY1B3Q02153 619 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
TNC-211ENST00000537320 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
TNC-211ENST00000537320 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
TNC-211ENST00000537320 SYCE3A1L190 88 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 SERPINC1P01008 464 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 CCT2P78371 535 aaKnown RBP13.35□□□□□ -0.27
TNC-211ENST00000537320 HAND2P61296 217 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 G2E3Q7L622 706 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 IL27Q8NEV9 243 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
TNC-211ENST00000537320 ZNF287Q9HBT7 754 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
TNC-211ENST00000537320 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
TNC-211ENST00000537320 TTC37Q6PGP7 1564 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 RFC4P35249 363 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
TNC-211ENST00000537320 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 MNS1Q8NEH6 495 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 CCDC196A0A1B0GTZ2 297 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 IQCA1Q86XH1 822 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 TMOD2Q9NZR1 351 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 CAMK4Q16566 473 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 NEK1Q96PY6 1258 aa13.34□□□□□ -0.27
TNC-211ENST00000537320 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
TNC-211ENST00000537320 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
TNC-211ENST00000537320 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 CEP57L1Q8IYX8 460 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 CHL1O00533 1208 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
TNC-211ENST00000537320 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
TNC-211ENST00000537320 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
TNC-211ENST00000537320 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
TNC-211ENST00000537320 GJB2P29033 226 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
TNC-211ENST00000537320 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
TNC-211ENST00000537320 BTG4Q9NY30 223 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 HMG20BQ9P0W2 317 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
TNC-211ENST00000537320 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
TNC-211ENST00000537320 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
TNC-211ENST00000537320 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 STIM1Q13586 685 aa13.31□□□□□ -0.28
TNC-211ENST00000537320 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
TNC-211ENST00000537320 CCP110O43303 1012 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms