RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 ZNF496Q96IT1 587 aaPredicted RBP8.48□□□□□ -1.05
IFT88-207ENST00000537103 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
IFT88-207ENST00000537103 STK24Q9Y6E0 443 aa8.48□□□□□ -1.05
IFT88-207ENST00000537103 ATP10DQ9P241 1426 aa8.48□□□□□ -1.05
IFT88-207ENST00000537103 ANKRD36CQ5JPF3 1778 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 CCDC30Q5VVM6 783 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
IFT88-207ENST00000537103 TRAIPQ9BWF2 469 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 HYPKQ9NX55 129 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
IFT88-207ENST00000537103 INTS5Q6P9B9 1019 aaKnown RBP8.47□□□□□ -1.05
IFT88-207ENST00000537103 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 DDX21Q9NR30 783 aaKnown RBP eCLIP8.47□□□□□ -1.05
IFT88-207ENST00000537103 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
IFT88-207ENST00000537103 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.05
IFT88-207ENST00000537103 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.05
IFT88-207ENST00000537103 ITPK1Q13572 414 aa8.46□□□□□ -1.05
IFT88-207ENST00000537103 LINC00116Q8NCU8 138 aa8.46□□□□□ -1.05
IFT88-207ENST00000537103 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.05
IFT88-207ENST00000537103 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
IFT88-207ENST00000537103 AK7Q96M32 723 aa8.46□□□□□ -1.06
IFT88-207ENST00000537103 LRRC4BQ9NT99 713 aa8.46□□□□□ -1.06
IFT88-207ENST00000537103 RRP7AQ9Y3A4 280 aaKnown RBP8.46□□□□□ -1.06
IFT88-207ENST00000537103 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
IFT88-207ENST00000537103 COL15A1P39059 1388 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 HSP90AB3PQ58FF7 597 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 DUSP27Q5VZP5 1158 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 PTPRCP08575 1304 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 CRKLP46109 303 aaKnown RBP8.45□□□□□ -1.06
IFT88-207ENST00000537103 ARHGAP45Q92619 1136 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
IFT88-207ENST00000537103 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 LAMB2P55268 1798 aa8.45□□□□□ -1.06
IFT88-207ENST00000537103 FAM182BQ5T319 152 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 LRP10Q7Z4F1 713 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 DNAJC10Q8IXB1 793 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 RBM42Q9BTD8 480 aaKnown RBP8.44□□□□□ -1.06
IFT88-207ENST00000537103 NARFQ9UHQ1 456 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 TRAK2O60296 914 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 VAMP4O75379 141 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 TWISTNBQ3B726 338 aaPredicted RBP8.44□□□□□ -1.06
IFT88-207ENST00000537103 PTF1AQ7RTS3 328 aa8.44□□□□□ -1.06
IFT88-207ENST00000537103 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
IFT88-207ENST00000537103 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
IFT88-207ENST00000537103 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
IFT88-207ENST00000537103 SLC39A6Q13433 755 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
IFT88-207ENST00000537103 PDIA6Q15084 440 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
IFT88-207ENST00000537103 THUMPD2Q9BTF0 503 aaKnown RBP8.43□□□□□ -1.06
IFT88-207ENST00000537103 KIF16BQ96L93 1317 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
IFT88-207ENST00000537103 MS4A1P11836 297 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 DEFB132Q7Z7B7 95 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 STK31Q9BXU1 1019 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 MTFR1LQ9H019 292 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 KCNQ3O43525 872 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
IFT88-207ENST00000537103 MAP3K15Q6ZN16 1313 aa8.41□□□□□ -1.06
IFT88-207ENST00000537103 PARP10Q53GL7 1025 aa8.41□□□□□ -1.06
IFT88-207ENST00000537103 KIF6Q6ZMV9 814 aa8.41□□□□□ -1.06
IFT88-207ENST00000537103 PLBD2Q8NHP8 589 aa8.41□□□□□ -1.06
IFT88-207ENST00000537103 RYDENQ9NUL5 291 aaKnown RBP8.41□□□□□ -1.06
IFT88-207ENST00000537103 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
IFT88-207ENST00000537103 PTCD1O75127 700 aaKnown RBP8.41□□□□□ -1.06
IFT88-207ENST00000537103 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
IFT88-207ENST00000537103 C8orf58Q8NAV2 365 aa8.41□□□□□ -1.06
IFT88-207ENST00000537103 ZFP91Q96JP5 570 aaPredicted RBP8.41□□□□□ -1.06
IFT88-207ENST00000537103 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.06
IFT88-207ENST00000537103 GNPATO15228 680 aa8.4□□□□□ -1.06
IFT88-207ENST00000537103 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
IFT88-207ENST00000537103 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
IFT88-207ENST00000537103 NBPF26B4DH59 902 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 CAMTA2O94983 1202 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 PDE4DQ08499 809 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.07
IFT88-207ENST00000537103 NBPF15Q8N660 670 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 KRI1Q8N9T8 703 aaKnown RBP8.4□□□□□ -1.07
IFT88-207ENST00000537103 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.07
IFT88-207ENST00000537103 TFCP2L1Q9NZI6 479 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 HDAC5Q9UQL6 1122 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.07
IFT88-207ENST00000537103 KAT6BQ8WYB5 2073 aa8.39□□□□□ -1.07
IFT88-207ENST00000537103 IPO8O15397 1037 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 C1QBPQ07021 282 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 API5Q9BZZ5 524 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 NYXQ9GZU5 481 aa8.39□□□□□ -1.07
IFT88-207ENST00000537103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 ZPR1O75312 459 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms