RNA–Protein interactions for RNA: ENST00000536911.1

SOX5-209, Transcript of SRY-box 5, humanhuman

TSL 3

Gene SOX5, Length 855 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-209ENST00000536911 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
SOX5-209ENST00000536911 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
SOX5-209ENST00000536911 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
SOX5-209ENST00000536911 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
SOX5-209ENST00000536911 KIF3CO14782 793 aa11.89□□□□□ -0.51
SOX5-209ENST00000536911 HOXB7P09629 217 aa11.89□□□□□ -0.51
SOX5-209ENST00000536911 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
SOX5-209ENST00000536911 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
SOX5-209ENST00000536911 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
SOX5-209ENST00000536911 PIGBQ92521 554 aa11.88□□□□□ -0.51
SOX5-209ENST00000536911 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
SOX5-209ENST00000536911 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
SOX5-209ENST00000536911 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
SOX5-209ENST00000536911 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
SOX5-209ENST00000536911 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
SOX5-209ENST00000536911 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
SOX5-209ENST00000536911 STK25O00506 426 aa11.87□□□□□ -0.51
SOX5-209ENST00000536911 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
SOX5-209ENST00000536911 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
SOX5-209ENST00000536911 STK31Q9BXU1 1019 aa11.87□□□□□ -0.51
SOX5-209ENST00000536911 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
SOX5-209ENST00000536911 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
SOX5-209ENST00000536911 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
SOX5-209ENST00000536911 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
SOX5-209ENST00000536911 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
SOX5-209ENST00000536911 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
SOX5-209ENST00000536911 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
SOX5-209ENST00000536911 HEG1Q9ULI3 1381 aa11.86□□□□□ -0.51
SOX5-209ENST00000536911 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
SOX5-209ENST00000536911 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
SOX5-209ENST00000536911 TRIM37O94972 964 aa11.85□□□□□ -0.51
SOX5-209ENST00000536911 STARD3NLO95772 234 aa11.85□□□□□ -0.51
SOX5-209ENST00000536911 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
SOX5-209ENST00000536911 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
SOX5-209ENST00000536911 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
SOX5-209ENST00000536911 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
SOX5-209ENST00000536911 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
SOX5-209ENST00000536911 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
SOX5-209ENST00000536911 NUDT7P0C024 238 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
SOX5-209ENST00000536911 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 CCDC125Q86Z20 511 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
SOX5-209ENST00000536911 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
SOX5-209ENST00000536911 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 ASAP1Q9ULH1 1129 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
SOX5-209ENST00000536911 LY75O60449 1722 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 KCNQ2O43526 872 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 BAG6P46379 1132 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 SIK1P57059 783 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 C5P01031 1676 aa11.83□□□□□ -0.52
SOX5-209ENST00000536911 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
SOX5-209ENST00000536911 APBA3O96018 575 aa11.82□□□□□ -0.52
SOX5-209ENST00000536911 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
SOX5-209ENST00000536911 ALDH1L2Q3SY69 923 aa11.82□□□□□ -0.52
SOX5-209ENST00000536911 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
SOX5-209ENST00000536911 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
SOX5-209ENST00000536911 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
SOX5-209ENST00000536911 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
SOX5-209ENST00000536911 TJP1Q07157 1748 aa11.81□□□□□ -0.52
SOX5-209ENST00000536911 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
SOX5-209ENST00000536911 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.52
SOX5-209ENST00000536911 C8orf58Q8NAV2 365 aa11.81□□□□□ -0.52
SOX5-209ENST00000536911 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
SOX5-209ENST00000536911 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
SOX5-209ENST00000536911 KCNQ3O43525 872 aa11.8□□□□□ -0.52
SOX5-209ENST00000536911 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
SOX5-209ENST00000536911 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
SOX5-209ENST00000536911 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
SOX5-209ENST00000536911 PLSCR1O15162 318 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 RGL2O15211 777 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
SOX5-209ENST00000536911 MS4A1P11836 297 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 PTGER2P43116 358 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
SOX5-209ENST00000536911 VAMP4O75379 141 aa11.78□□□□□ -0.52
SOX5-209ENST00000536911 PPP1R37O75864 691 aa11.78□□□□□ -0.52
SOX5-209ENST00000536911 KRT24Q2M2I5 525 aa11.78□□□□□ -0.52
SOX5-209ENST00000536911 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
SOX5-209ENST00000536911 SLC34A2O95436 690 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 NEFLP07196 543 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
SOX5-209ENST00000536911 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 AK7Q96M32 723 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 PTPRCP08575 1304 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 C4BP0C0L5 1744 aa11.77□□□□□ -0.53
SOX5-209ENST00000536911 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
SOX5-209ENST00000536911 RREB1Q92766 1687 aa11.76□□□□□ -0.53
SOX5-209ENST00000536911 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
SOX5-209ENST00000536911 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
SOX5-209ENST00000536911 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
SOX5-209ENST00000536911 NECTIN2Q92692 538 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms