RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 SPINK5Q9NQ38 1064 aaPredicted RBP27.12■■□□□ 1.93
LPCAT3-204ENST00000536797 DBF4Q9UBU7 674 aaPredicted RBP27.12■■□□□ 1.93
LPCAT3-204ENST00000536797 TBC1D9BQ66K14 1250 aa27.11■■□□□ 1.93
LPCAT3-204ENST00000536797 TTLL7Q6ZT98 887 aa27.11■■□□□ 1.93
LPCAT3-204ENST00000536797 TSPYL6Q8N831 410 aa27.11■■□□□ 1.93
LPCAT3-204ENST00000536797 MAP3K15Q6ZN16 1313 aa27.1■■□□□ 1.93
LPCAT3-204ENST00000536797 ERVV-1B6SEH8 477 aa27.09■■□□□ 1.93
LPCAT3-204ENST00000536797 TWISTNBQ3B726 338 aaPredicted RBP27.09■■□□□ 1.93
LPCAT3-204ENST00000536797 AFDNP55196 1824 aaKnown RBP27.09■■□□□ 1.93
LPCAT3-204ENST00000536797 KIF13BQ9NQT8 1826 aa27.09■■□□□ 1.93
LPCAT3-204ENST00000536797 SERPINB2P05120 415 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 CCDC30Q5VVM6 783 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 C10orf71Q711Q0 1435 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 NLGN2Q8NFZ4 835 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 ZBTB3Q9H5J0 574 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 NUP98P52948 1817 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 CARMIL3Q8ND23 1372 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 NRXN2Q9P2S2 1712 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 HLFQ16534 295 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 COPS6Q7L5N1 327 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 XAGE3Q8WTP9 111 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 HYPKQ9NX55 129 aa27.07■■□□□ 1.92
LPCAT3-204ENST00000536797 EXOSC9Q06265 439 aaKnown RBP27.06■■□□□ 1.92
LPCAT3-204ENST00000536797 AIMP1Q12904 312 aaKnown RBP27.06■■□□□ 1.92
LPCAT3-204ENST00000536797 E9PSI1 815 aa27.05■■□□□ 1.92
LPCAT3-204ENST00000536797 NIP7Q9Y221 180 aaKnown RBP eCLIP27.03■■□□□ 1.92
LPCAT3-204ENST00000536797 GIGYF2Q6Y7W6 1299 aaKnown RBP27.02■■□□□ 1.92
LPCAT3-204ENST00000536797 STK31Q9BXU1 1019 aa27.02■■□□□ 1.92
LPCAT3-204ENST00000536797 DCAF8L1A6NGE4 600 aa27.01■■□□□ 1.91
LPCAT3-204ENST00000536797 ATP10DQ9P241 1426 aa27.01■■□□□ 1.91
LPCAT3-204ENST00000536797 NPHP1O15259 732 aa27■■□□□ 1.91
LPCAT3-204ENST00000536797 TGFB2P61812 414 aa27■■□□□ 1.91
LPCAT3-204ENST00000536797 VAMP4O75379 141 aa26.99■■□□□ 1.91
LPCAT3-204ENST00000536797 HNRNPUQ00839 825 aaKnown RBP eCLIP26.99■■□□□ 1.91
LPCAT3-204ENST00000536797 SLFN5Q08AF3 891 aa26.99■■□□□ 1.91
LPCAT3-204ENST00000536797 NBPF5PQ86XG9 351 aaPredicted RBP26.99■■□□□ 1.91
LPCAT3-204ENST00000536797 CNBD1Q8NA66 436 aa26.99■■□□□ 1.91
LPCAT3-204ENST00000536797 PXDNLA1KZ92 1463 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 KIAA1551Q9HCM1 1747 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 N4BP2Q86UW6 1770 aaPredicted RBP26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 HSP90AB3PQ58FF7 597 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 PRR5LQ6MZQ0 368 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 ANKRD13DQ6ZTN6 518 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 PLBD2Q8NHP8 589 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 CDCA7LQ96GN5 454 aa26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 PHAXQ9H814 394 aaKnown RBP26.98■■□□□ 1.91
LPCAT3-204ENST00000536797 ANKRD36CQ5JPF3 1778 aa26.97■■□□□ 1.91
LPCAT3-204ENST00000536797 TCERG1O14776 1098 aaKnown RBP26.97■■□□□ 1.91
LPCAT3-204ENST00000536797 GPTP24298 496 aa26.96■■□□□ 1.91
LPCAT3-204ENST00000536797 ST5P78524 1137 aa26.96■■□□□ 1.91
LPCAT3-204ENST00000536797 ZNF34Q8IZ26 560 aa26.96■■□□□ 1.91
LPCAT3-204ENST00000536797 CACNA1FO60840 1977 aa26.96■■□□□ 1.91
LPCAT3-204ENST00000536797 TPTE2Q6XPS3 522 aa26.95■■□□□ 1.9
LPCAT3-204ENST00000536797 ARFGEF2Q9Y6D5 1785 aa26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 FAM177BA6PVY3 158 aa26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 SLC4A2P04920 1241 aa26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 PELP1Q8IZL8 1130 aaKnown RBP26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 NYXQ9GZU5 481 aa26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 UBN2Q6ZU65 1347 aa26.94■■□□□ 1.9
LPCAT3-204ENST00000536797 A0A0G2JLW4 131 aa26.93■■□□□ 1.9
LPCAT3-204ENST00000536797 DDX58O95786 925 aaKnown RBP26.93■■□□□ 1.9
LPCAT3-204ENST00000536797 GPR162Q16538 588 aa26.93■■□□□ 1.9
LPCAT3-204ENST00000536797 PARP10Q53GL7 1025 aa26.93■■□□□ 1.9
LPCAT3-204ENST00000536797 DPEP1P16444 411 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 TCIRG1Q13488 830 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 RIC3Q7Z5B4 369 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 CCDC24Q8N4L8 307 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 ANKRD31Q8N7Z5 1873 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 BRIP1Q9BX63 1249 aa26.92■■□□□ 1.9
LPCAT3-204ENST00000536797 IBTKQ9P2D0 1353 aaPredicted RBP26.91■■□□□ 1.9
LPCAT3-204ENST00000536797 GTF2E1P29083 439 aaPredicted RBP26.91■■□□□ 1.9
LPCAT3-204ENST00000536797 TRMT2AQ8IZ69 625 aaKnown RBP26.91■■□□□ 1.9
LPCAT3-204ENST00000536797 GOLGB1Q14789 3259 aaKnown RBP26.91■■□□□ 1.9
LPCAT3-204ENST00000536797 PDE6BP35913 854 aa26.9■■□□□ 1.9
LPCAT3-204ENST00000536797 PPP1R42Q7Z4L9 355 aa26.9■■□□□ 1.9
LPCAT3-204ENST00000536797 SUSD4Q5VX71 490 aa26.9■■□□□ 1.9
LPCAT3-204ENST00000536797 BRCA1P38398 1863 aaKnown RBP26.89■■□□□ 1.9
LPCAT3-204ENST00000536797 CHRNA5P30532 468 aa26.89■■□□□ 1.89
LPCAT3-204ENST00000536797 WWC3Q9ULE0 1092 aa26.89■■□□□ 1.89
LPCAT3-204ENST00000536797 G2E3Q7L622 706 aa26.88■■□□□ 1.89
LPCAT3-204ENST00000536797 PDZRN3Q9UPQ7 1066 aa26.88■■□□□ 1.89
LPCAT3-204ENST00000536797 DLEC1Q9Y238 1755 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 H0YIN7 160 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 KCNA3P22001 575 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 FLIIQ13045 1269 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 C2CD5Q86YS7 1000 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 PIM2Q9P1W9 311 aa26.87■■□□□ 1.89
LPCAT3-204ENST00000536797 NTSR2O95665 410 aa26.86■■□□□ 1.89
LPCAT3-204ENST00000536797 NLRP10Q86W26 655 aa26.86■■□□□ 1.89
LPCAT3-204ENST00000536797 NUTM1Q86Y26 1132 aa26.86■■□□□ 1.89
LPCAT3-204ENST00000536797 UTP14AQ9BVJ6 771 aaKnown RBP26.86■■□□□ 1.89
LPCAT3-204ENST00000536797 UTRNP46939 3433 aa26.86■■□□□ 1.89
LPCAT3-204ENST00000536797 YBX3P16989 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
LPCAT3-204ENST00000536797 KSR2Q6VAB6 950 aa26.85■■□□□ 1.89
LPCAT3-204ENST00000536797 ISCA1Q9BUE6 129 aa26.85■■□□□ 1.89
LPCAT3-204ENST00000536797 ZBED9Q6R2W3 1325 aa26.85■■□□□ 1.89
LPCAT3-204ENST00000536797 PI4KAP2A4QPH2 592 aa26.84■■□□□ 1.89
LPCAT3-204ENST00000536797 ERFEQ4G0M1 354 aa26.84■■□□□ 1.89
LPCAT3-204ENST00000536797 PI4KAP1Q8N8J0 262 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms