RNA–Protein interactions for RNA: ENST00000536702.1

CUL3-213, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-213ENST00000536702 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
CUL3-213ENST00000536702 PDE6BP35913 854 aa20.47■□□□□ 0.87
CUL3-213ENST00000536702 NPM2Q86SE8 214 aaKnown RBP20.47■□□□□ 0.87
CUL3-213ENST00000536702 SMC1BQ8NDV3 1235 aa20.47■□□□□ 0.87
CUL3-213ENST00000536702 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
CUL3-213ENST00000536702 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
CUL3-213ENST00000536702 NPHP1O15259 732 aa20.46■□□□□ 0.87
CUL3-213ENST00000536702 C21orf2O43822 256 aa20.46■□□□□ 0.87
CUL3-213ENST00000536702 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
CUL3-213ENST00000536702 CNBD1Q8NA66 436 aa20.46■□□□□ 0.87
CUL3-213ENST00000536702 SETDB2Q96T68 719 aa20.46■□□□□ 0.87
CUL3-213ENST00000536702 PCNTO95613 3336 aa20.45■□□□□ 0.86
CUL3-213ENST00000536702 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
CUL3-213ENST00000536702 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
CUL3-213ENST00000536702 MCM10Q7L590 875 aa20.45■□□□□ 0.86
CUL3-213ENST00000536702 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
CUL3-213ENST00000536702 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
CUL3-213ENST00000536702 CACNA1SQ13698 1873 aa20.44■□□□□ 0.86
CUL3-213ENST00000536702 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
CUL3-213ENST00000536702 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
CUL3-213ENST00000536702 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
CUL3-213ENST00000536702 PPP2R1AP30153 589 aa20.43■□□□□ 0.86
CUL3-213ENST00000536702 ST5P78524 1137 aa20.43■□□□□ 0.86
CUL3-213ENST00000536702 RTF1Q92541 710 aaKnown RBP20.43■□□□□ 0.86
CUL3-213ENST00000536702 SLX4Q8IY92 1834 aa20.42■□□□□ 0.86
CUL3-213ENST00000536702 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
CUL3-213ENST00000536702 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
CUL3-213ENST00000536702 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
CUL3-213ENST00000536702 STYK1Q6J9G0 422 aa20.4■□□□□ 0.86
CUL3-213ENST00000536702 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
CUL3-213ENST00000536702 JMYQ8N9B5 988 aa20.4■□□□□ 0.86
CUL3-213ENST00000536702 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
CUL3-213ENST00000536702 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
CUL3-213ENST00000536702 ARFGEF2Q9Y6D5 1785 aa20.4■□□□□ 0.86
CUL3-213ENST00000536702 POTECB2RU33 542 aa20.39■□□□□ 0.85
CUL3-213ENST00000536702 SRGNP10124 158 aa20.39■□□□□ 0.85
CUL3-213ENST00000536702 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
CUL3-213ENST00000536702 CNKSR1Q969H4 720 aa20.39■□□□□ 0.85
CUL3-213ENST00000536702 LTBP3Q9NS15 1303 aa20.38■□□□□ 0.85
CUL3-213ENST00000536702 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
CUL3-213ENST00000536702 NBPF26B4DH59 902 aa20.37■□□□□ 0.85
CUL3-213ENST00000536702 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
CUL3-213ENST00000536702 NBPF10Q6P3W6 841 aaKnown RBP20.37■□□□□ 0.85
CUL3-213ENST00000536702 NBPF15Q8N660 670 aa20.37■□□□□ 0.85
CUL3-213ENST00000536702 ZNF652Q9Y2D9 606 aa20.37■□□□□ 0.85
CUL3-213ENST00000536702 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
CUL3-213ENST00000536702 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
CUL3-213ENST00000536702 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
CUL3-213ENST00000536702 LAMB4A4D0S4 1761 aa20.35■□□□□ 0.85
CUL3-213ENST00000536702 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
CUL3-213ENST00000536702 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
CUL3-213ENST00000536702 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
CUL3-213ENST00000536702 DDNO94850 711 aaPredicted RBP20.33■□□□□ 0.85
CUL3-213ENST00000536702 NPR1P16066 1061 aa20.32■□□□□ 0.84
CUL3-213ENST00000536702 DSG3P32926 999 aa20.32■□□□□ 0.84
CUL3-213ENST00000536702 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
CUL3-213ENST00000536702 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
CUL3-213ENST00000536702 COL13A1Q5TAT6 717 aaPredicted RBP20.32■□□□□ 0.84
CUL3-213ENST00000536702 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 HLFQ16534 295 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 OLFM4Q6UX06 510 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
CUL3-213ENST00000536702 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
CUL3-213ENST00000536702 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
CUL3-213ENST00000536702 NGEFQ8N5V2 710 aa20.29■□□□□ 0.84
CUL3-213ENST00000536702 ZNF277Q9NRM2 450 aaPredicted RBP20.29■□□□□ 0.84
CUL3-213ENST00000536702 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
CUL3-213ENST00000536702 RGL2O15211 777 aa20.28■□□□□ 0.84
CUL3-213ENST00000536702 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
CUL3-213ENST00000536702 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
CUL3-213ENST00000536702 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
CUL3-213ENST00000536702 NEFMP07197 916 aa20.27■□□□□ 0.84
CUL3-213ENST00000536702 HSPA1AP0DMV8 641 aaKnown RBP20.27■□□□□ 0.84
CUL3-213ENST00000536702 HSPA1BP0DMV9 641 aaKnown RBP20.27■□□□□ 0.84
CUL3-213ENST00000536702 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
CUL3-213ENST00000536702 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
CUL3-213ENST00000536702 NUTM1Q86Y26 1132 aa20.25■□□□□ 0.83
CUL3-213ENST00000536702 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
CUL3-213ENST00000536702 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
CUL3-213ENST00000536702 IQCA1LA6NCM1 817 aa20.24■□□□□ 0.83
CUL3-213ENST00000536702 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
CUL3-213ENST00000536702 NFE2L2Q16236 605 aa20.24■□□□□ 0.83
CUL3-213ENST00000536702 TTLL7Q6ZT98 887 aa20.24■□□□□ 0.83
CUL3-213ENST00000536702 L3MBTL3Q96JM7 780 aaPredicted RBP20.24■□□□□ 0.83
CUL3-213ENST00000536702 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
CUL3-213ENST00000536702 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
CUL3-213ENST00000536702 MAP3K15Q6ZN16 1313 aa20.24■□□□□ 0.83
CUL3-213ENST00000536702 MYL6BP14649 208 aa20.23■□□□□ 0.83
CUL3-213ENST00000536702 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
CUL3-213ENST00000536702 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
CUL3-213ENST00000536702 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
CUL3-213ENST00000536702 SCN4AP35499 1836 aa20.23■□□□□ 0.83
CUL3-213ENST00000536702 NUP98P52948 1817 aa20.23■□□□□ 0.83
CUL3-213ENST00000536702 GPTP24298 496 aa20.22■□□□□ 0.83
CUL3-213ENST00000536702 LDHDQ86WU2 507 aa20.22■□□□□ 0.83
CUL3-213ENST00000536702 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
CUL3-213ENST00000536702 TNS4Q8IZW8 715 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms