RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 MSNP26038 577 aaKnown RBP9.59□□□□□ -0.87
CPSF7-216ENST00000536548 CTCFP49711 727 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-216ENST00000536548 RGS19P49795 217 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 MTHFSP49914 203 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 TGFB2P61812 414 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 AK7Q96M32 723 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 OFD1O75665 1012 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-216ENST00000536548 TRIM27P14373 513 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 KCNA3P22001 575 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-216ENST00000536548 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPSF7-216ENST00000536548 KLHL40Q2TBA0 621 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 CHD1LQ86WJ1 897 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 LTV1Q96GA3 475 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-216ENST00000536548 ZBTB40Q9NUA8 1239 aa9.58□□□□□ -0.88
CPSF7-216ENST00000536548 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-216ENST00000536548 NUCB2P80303 420 aa9.57□□□□□ -0.88
CPSF7-216ENST00000536548 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
CPSF7-216ENST00000536548 MTERF4Q7Z6M4 381 aaKnown RBP9.57□□□□□ -0.88
CPSF7-216ENST00000536548 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
CPSF7-216ENST00000536548 PALLDQ8WX93 1383 aa9.57□□□□□ -0.88
CPSF7-216ENST00000536548 RGPD2P0DJD1 1756 aa9.57□□□□□ -0.88
CPSF7-216ENST00000536548 EVC2Q86UK5 1308 aa9.56□□□□□ -0.88
CPSF7-216ENST00000536548 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-216ENST00000536548 ZNF445P59923 1031 aa9.56□□□□□ -0.88
CPSF7-216ENST00000536548 ZCRB1Q8TBF4 217 aaKnown RBP9.56□□□□□ -0.88
CPSF7-216ENST00000536548 SSH1Q8WYL5 1049 aa9.56□□□□□ -0.88
CPSF7-216ENST00000536548 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
CPSF7-216ENST00000536548 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
CPSF7-216ENST00000536548 CDC45O75419 566 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 MCM5P33992 734 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 TMPOP42166 694 aaKnown RBP9.55□□□□□ -0.88
CPSF7-216ENST00000536548 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
CPSF7-216ENST00000536548 CALD1Q05682 793 aaKnown RBP9.55□□□□□ -0.88
CPSF7-216ENST00000536548 RABEP1Q15276 862 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 CSPP1Q1MSJ5 1256 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 DCAF5Q96JK2 942 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 NOB1Q9ULX3 412 aaKnown RBP9.55□□□□□ -0.88
CPSF7-216ENST00000536548 DDX49Q9Y6V7 483 aaKnown RBP9.55□□□□□ -0.88
CPSF7-216ENST00000536548 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
CPSF7-216ENST00000536548 POTECB2RU33 542 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 SSFA2P28290 1259 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 VEGFBP49765 207 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 GAS2L3Q86XJ1 694 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.54□□□□□ -0.88
CPSF7-216ENST00000536548 LINC00116Q8NCU8 138 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 ARHGAP45Q92619 1136 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
CPSF7-216ENST00000536548 MEGF6O75095 1541 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 FAM208AQ9UK61 1670 aaKnown RBP9.54□□□□□ -0.88
CPSF7-216ENST00000536548 TTC21AQ8NDW8 1320 aa9.54□□□□□ -0.88
CPSF7-216ENST00000536548 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 CNTNAP1P78357 1384 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 GLTPD2A6NH11 291 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 BAG4O95429 457 aaKnown RBP9.53□□□□□ -0.88
CPSF7-216ENST00000536548 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
CPSF7-216ENST00000536548 RASSF7Q02833 373 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 NME9Q86XW9 330 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 TSR2Q969E8 191 aaKnown RBP9.53□□□□□ -0.88
CPSF7-216ENST00000536548 LNPKQ9C0E8 428 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
CPSF7-216ENST00000536548 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.88
CPSF7-216ENST00000536548 ITGB4P16144 1822 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 GNPATO15228 680 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 ZNF500O60304 480 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-216ENST00000536548 C4AP0C0L4 1744 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 POTEIP0CG38 1075 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
CPSF7-216ENST00000536548 PLEKHF1Q96S99 279 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
CPSF7-216ENST00000536548 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-216ENST00000536548 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
CPSF7-216ENST00000536548 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
CPSF7-216ENST00000536548 ANKRD45Q5TZF3 282 aa9.51□□□□□ -0.89
CPSF7-216ENST00000536548 CASC1Q6TDU7 716 aa9.51□□□□□ -0.89
CPSF7-216ENST00000536548 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
CPSF7-216ENST00000536548 KIF2CQ99661 725 aa9.51□□□□□ -0.89
CPSF7-216ENST00000536548 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
CPSF7-216ENST00000536548 CHRNA5P30532 468 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 RIPK4P57078 832 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 ITPK1Q13572 414 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 IP6K1Q92551 441 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 API5Q9BZZ5 524 aaKnown RBP9.5□□□□□ -0.89
CPSF7-216ENST00000536548 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 NOL7Q9UMY1 257 aaKnown RBP9.5□□□□□ -0.89
CPSF7-216ENST00000536548 TIAM2Q8IVF5 1701 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
CPSF7-216ENST00000536548 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 ST18O60284 1047 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms