RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 KIF1BPQ96EK5 621 aa27.98■■■□□ 2.07
HMGA2-206ENST00000536545 PLBD2Q8NHP8 589 aa27.97■■■□□ 2.07
HMGA2-206ENST00000536545 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
HMGA2-206ENST00000536545 TSHZ3Q63HK5 1081 aa27.96■■■□□ 2.07
HMGA2-206ENST00000536545 IL1RAPL2Q9NP60 686 aa27.96■■■□□ 2.07
HMGA2-206ENST00000536545 PIGBQ92521 554 aa27.95■■■□□ 2.06
HMGA2-206ENST00000536545 TBC1D2Q9BYX2 928 aa27.95■■■□□ 2.06
HMGA2-206ENST00000536545 BICC1Q9H694 974 aaKnown RBP27.95■■■□□ 2.06
HMGA2-206ENST00000536545 COL15A1P39059 1388 aa27.95■■■□□ 2.06
HMGA2-206ENST00000536545 NWD2Q9ULI1 1742 aa27.95■■■□□ 2.06
HMGA2-206ENST00000536545 TOM1O60784 492 aa27.94■■■□□ 2.06
HMGA2-206ENST00000536545 ADAMTS2O95450 1211 aa27.94■■■□□ 2.06
HMGA2-206ENST00000536545 BCL9O00512 1426 aa27.93■■■□□ 2.06
HMGA2-206ENST00000536545 SPATA31A1Q5TZJ5 1347 aa27.92■■■□□ 2.06
HMGA2-206ENST00000536545 A1BGP04217 495 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 CASC1Q6TDU7 716 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 TJP1Q07157 1748 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 VSIG10Q8N0Z9 540 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 KIF2CQ99661 725 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 ATG3Q9NT62 314 aa27.91■■■□□ 2.06
HMGA2-206ENST00000536545 SLIT2O94813 1529 aa27.9■■■□□ 2.06
HMGA2-206ENST00000536545 DOT1LQ8TEK3 1739 aa27.9■■■□□ 2.06
HMGA2-206ENST00000536545 TTLL7Q6ZT98 887 aa27.9■■■□□ 2.06
HMGA2-206ENST00000536545 CDCA7Q9BWT1 371 aaPredicted RBP27.9■■■□□ 2.06
HMGA2-206ENST00000536545 EXOC5O00471 708 aa27.89■■■□□ 2.06
HMGA2-206ENST00000536545 THRAP3Q9Y2W1 955 aaKnown RBP27.89■■■□□ 2.06
HMGA2-206ENST00000536545 USP42Q9H9J4 1324 aaKnown RBP27.89■■■□□ 2.06
HMGA2-206ENST00000536545 PIP4K2BP78356 416 aa27.88■■■□□ 2.05
HMGA2-206ENST00000536545 NUTM1Q86Y26 1132 aa27.88■■■□□ 2.05
HMGA2-206ENST00000536545 ERC1Q8IUD2 1116 aa27.88■■■□□ 2.05
HMGA2-206ENST00000536545 PA2G4Q9UQ80 394 aaKnown RBP27.88■■■□□ 2.05
HMGA2-206ENST00000536545 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.88■■■□□ 2.05
HMGA2-206ENST00000536545 OS9Q13438 667 aaPredicted RBP27.88■■■□□ 2.05
HMGA2-206ENST00000536545 EPHA10Q5JZY3 1008 aa27.88■■■□□ 2.05
HMGA2-206ENST00000536545 ATP5J2-PTCD1G3V325 749 aa27.86■■■□□ 2.05
HMGA2-206ENST00000536545 CASP7P55210 303 aa27.86■■■□□ 2.05
HMGA2-206ENST00000536545 PI4K2BQ8TCG2 481 aa27.86■■■□□ 2.05
HMGA2-206ENST00000536545 TEX13AQ9BXU3 409 aaPredicted RBP27.86■■■□□ 2.05
HMGA2-206ENST00000536545 NBR1Q14596 966 aa27.85■■■□□ 2.05
HMGA2-206ENST00000536545 RABL6Q3YEC7 729 aaPredicted RBP27.84■■■□□ 2.05
HMGA2-206ENST00000536545 SPATA31A5Q5VU36 1347 aa27.84■■■□□ 2.05
HMGA2-206ENST00000536545 UBE3BQ7Z3V4 1068 aa27.84■■■□□ 2.05
HMGA2-206ENST00000536545 SPATA31A7Q8IWB4 1347 aa27.84■■■□□ 2.05
HMGA2-206ENST00000536545 DNAJC10Q8IXB1 793 aa27.84■■■□□ 2.05
HMGA2-206ENST00000536545 USP26Q9BXU7 913 aa27.84■■■□□ 2.05
HMGA2-206ENST00000536545 SNX21Q969T3 373 aa27.83■■■□□ 2.05
HMGA2-206ENST00000536545 A0A087WZG4 1122 aa27.83■■■□□ 2.05
HMGA2-206ENST00000536545 NUTM2BA6NNL0 878 aaPredicted RBP27.83■■■□□ 2.05
HMGA2-206ENST00000536545 NUTM2EB1AL46 878 aaPredicted RBP27.83■■■□□ 2.05
HMGA2-206ENST00000536545 ERC2O15083 957 aa27.83■■■□□ 2.05
HMGA2-206ENST00000536545 NUTM2AQ8IVF1 878 aaPredicted RBP27.83■■■□□ 2.05
HMGA2-206ENST00000536545 TTC41PQ6P2S7 1318 aa27.82■■■□□ 2.04
HMGA2-206ENST00000536545 REC8O95072 547 aa27.81■■■□□ 2.04
HMGA2-206ENST00000536545 UNC5CLQ8IV45 518 aa27.81■■■□□ 2.04
HMGA2-206ENST00000536545 CLASRPQ8N2M8 674 aaKnown RBP27.81■■■□□ 2.04
HMGA2-206ENST00000536545 TRIM6-TRIM34B2RNG4 842 aa27.81■■■□□ 2.04
HMGA2-206ENST00000536545 AK9Q5TCS8 1911 aa27.8■■■□□ 2.04
HMGA2-206ENST00000536545 H7C1W4 665 aa27.8■■■□□ 2.04
HMGA2-206ENST00000536545 SASH1O94885 1247 aa27.8■■■□□ 2.04
HMGA2-206ENST00000536545 RFX5P48382 616 aaPredicted RBP27.8■■■□□ 2.04
HMGA2-206ENST00000536545 HSCBQ8IWL3 235 aa27.8■■■□□ 2.04
HMGA2-206ENST00000536545 JARID2Q92833 1246 aaPredicted RBP27.8■■■□□ 2.04
HMGA2-206ENST00000536545 ZBTB3Q9H5J0 574 aa27.8■■■□□ 2.04
HMGA2-206ENST00000536545 CWC25Q9NXE8 425 aaPredicted RBP27.8■■■□□ 2.04
HMGA2-206ENST00000536545 CHMLP26374 656 aa27.79■■■□□ 2.04
HMGA2-206ENST00000536545 SLC4A9Q96Q91 983 aa27.79■■■□□ 2.04
HMGA2-206ENST00000536545 ESYT1Q9BSJ8 1104 aa27.79■■■□□ 2.04
HMGA2-206ENST00000536545 ANTXR1Q9H6X2 564 aa27.79■■■□□ 2.04
HMGA2-206ENST00000536545 STARD3NLO95772 234 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 G3BP1Q13283 466 aaKnown RBP eCLIP27.78■■■□□ 2.04
HMGA2-206ENST00000536545 DDB1Q16531 1140 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 RILPL2Q969X0 211 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 RBM42Q9BTD8 480 aaKnown RBP27.78■■■□□ 2.04
HMGA2-206ENST00000536545 COPRSQ9NQ92 184 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 BARGINQ6ZT62 677 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 CCDC191Q8NCU4 936 aa27.78■■■□□ 2.04
HMGA2-206ENST00000536545 GLRX3O76003 335 aaKnown RBP27.76■■■□□ 2.03
HMGA2-206ENST00000536545 KLHDC4Q8TBB5 520 aa27.76■■■□□ 2.03
HMGA2-206ENST00000536545 ISCA1Q9BUE6 129 aa27.76■■■□□ 2.03
HMGA2-206ENST00000536545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.76■■■□□ 2.03
HMGA2-206ENST00000536545 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
HMGA2-206ENST00000536545 ECHDC1Q9NTX5 307 aa27.75■■■□□ 2.03
HMGA2-206ENST00000536545 CYP19A1P11511 503 aaPredicted RBP27.74■■■□□ 2.03
HMGA2-206ENST00000536545 PTPN12Q05209 780 aaKnown RBP27.74■■■□□ 2.03
HMGA2-206ENST00000536545 AACSQ86V21 672 aa27.74■■■□□ 2.03
HMGA2-206ENST00000536545 SYTL4Q96C24 671 aaPredicted RBP27.74■■■□□ 2.03
HMGA2-206ENST00000536545 GPATCH3Q96I76 525 aa27.74■■■□□ 2.03
HMGA2-206ENST00000536545 SIL1Q9H173 461 aa27.74■■■□□ 2.03
HMGA2-206ENST00000536545 JCADQ9P266 1359 aa27.74■■■□□ 2.03
HMGA2-206ENST00000536545 CICQ96RK0 1608 aaPredicted RBP27.73■■■□□ 2.03
HMGA2-206ENST00000536545 IFIT2P09913 472 aaKnown RBP27.73■■■□□ 2.03
HMGA2-206ENST00000536545 FOXO4P98177 505 aa27.73■■■□□ 2.03
HMGA2-206ENST00000536545 SLKQ9H2G2 1235 aaPredicted RBP27.73■■■□□ 2.03
HMGA2-206ENST00000536545 RABEP1Q15276 862 aa27.73■■■□□ 2.03
HMGA2-206ENST00000536545 MARCH10Q8NA82 808 aaPredicted RBP27.73■■■□□ 2.03
HMGA2-206ENST00000536545 TCIRG1Q13488 830 aa27.72■■■□□ 2.03
HMGA2-206ENST00000536545 KIF6Q6ZMV9 814 aa27.72■■■□□ 2.03
HMGA2-206ENST00000536545 EAF2Q96CJ1 260 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms