RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 A1BGP04217 495 aa14.84□□□□□ -0.03
LMO3-213ENST00000536172 HTRA3P83110 453 aa14.84□□□□□ -0.03
LMO3-213ENST00000536172 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
LMO3-213ENST00000536172 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
LMO3-213ENST00000536172 SLX4Q8IY92 1834 aa14.84□□□□□ -0.03
LMO3-213ENST00000536172 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
LMO3-213ENST00000536172 DZIP3Q86Y13 1208 aaKnown RBP14.83□□□□□ -0.04
LMO3-213ENST00000536172 MASTLQ96GX5 879 aa14.83□□□□□ -0.04
LMO3-213ENST00000536172 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
LMO3-213ENST00000536172 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
LMO3-213ENST00000536172 SNRPA1P09661 255 aaKnown RBP14.82□□□□□ -0.04
LMO3-213ENST00000536172 SRGNP10124 158 aa14.82□□□□□ -0.04
LMO3-213ENST00000536172 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
LMO3-213ENST00000536172 SCN4AP35499 1836 aa14.82□□□□□ -0.04
LMO3-213ENST00000536172 PRPF40BQ6NWY9 871 aaKnown RBP14.81□□□□□ -0.04
LMO3-213ENST00000536172 POTECB2RU33 542 aa14.8□□□□□ -0.04
LMO3-213ENST00000536172 TPTE2Q6XPS3 522 aa14.8□□□□□ -0.04
LMO3-213ENST00000536172 NBPF5PQ86XG9 351 aaPredicted RBP14.8□□□□□ -0.04
LMO3-213ENST00000536172 USP16Q9Y5T5 823 aa14.8□□□□□ -0.04
LMO3-213ENST00000536172 IQCA1LA6NCM1 817 aa14.79□□□□□ -0.04
LMO3-213ENST00000536172 KCNQ3O43525 872 aa14.79□□□□□ -0.04
LMO3-213ENST00000536172 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
LMO3-213ENST00000536172 NPR1P16066 1061 aa14.79□□□□□ -0.04
LMO3-213ENST00000536172 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
LMO3-213ENST00000536172 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
LMO3-213ENST00000536172 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
LMO3-213ENST00000536172 KLRG2A4D1S0 409 aaPredicted RBP14.78□□□□□ -0.04
LMO3-213ENST00000536172 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
LMO3-213ENST00000536172 COL13A1Q5TAT6 717 aaPredicted RBP14.78□□□□□ -0.04
LMO3-213ENST00000536172 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
LMO3-213ENST00000536172 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
LMO3-213ENST00000536172 LAMB4A4D0S4 1761 aa14.78□□□□□ -0.04
LMO3-213ENST00000536172 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
LMO3-213ENST00000536172 NEFMP07197 916 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 PPP2R1AP30153 589 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 ALDH1B1P30837 517 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 TAF7Q15545 349 aaPredicted RBP14.76□□□□□ -0.05
LMO3-213ENST00000536172 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
LMO3-213ENST00000536172 MCM10Q7L590 875 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 RTKN2Q8IZC4 609 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
LMO3-213ENST00000536172 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
LMO3-213ENST00000536172 NIP7Q9Y221 180 aaKnown RBP eCLIP14.76□□□□□ -0.05
LMO3-213ENST00000536172 PCNTO95613 3336 aa14.75□□□□□ -0.05
LMO3-213ENST00000536172 DDNO94850 711 aaPredicted RBP14.75□□□□□ -0.05
LMO3-213ENST00000536172 TNS4Q8IZW8 715 aa14.75□□□□□ -0.05
LMO3-213ENST00000536172 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
LMO3-213ENST00000536172 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
LMO3-213ENST00000536172 NUP98P52948 1817 aa14.74□□□□□ -0.05
LMO3-213ENST00000536172 HSPA1AP0DMV8 641 aaKnown RBP14.74□□□□□ -0.05
LMO3-213ENST00000536172 HSPA1BP0DMV9 641 aaKnown RBP14.74□□□□□ -0.05
LMO3-213ENST00000536172 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
LMO3-213ENST00000536172 LDHDQ86WU2 507 aa14.74□□□□□ -0.05
LMO3-213ENST00000536172 NYXQ9GZU5 481 aa14.74□□□□□ -0.05
LMO3-213ENST00000536172 PRAMEF22A3QJZ6 481 aa14.73□□□□□ -0.05
LMO3-213ENST00000536172 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
LMO3-213ENST00000536172 GTF2E1P29083 439 aaPredicted RBP14.73□□□□□ -0.05
LMO3-213ENST00000536172 PIP4K2AP48426 406 aaPredicted RBP14.73□□□□□ -0.05
LMO3-213ENST00000536172 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
LMO3-213ENST00000536172 NBPF10Q6P3W6 841 aaKnown RBP14.73□□□□□ -0.05
LMO3-213ENST00000536172 NBPF15Q8N660 670 aa14.73□□□□□ -0.05
LMO3-213ENST00000536172 KDM3BQ7LBC6 1761 aa14.73□□□□□ -0.05
LMO3-213ENST00000536172 ERVV-1B6SEH8 477 aa14.72□□□□□ -0.05
LMO3-213ENST00000536172 CC2D2BQ6DHV5 1058 aa14.72□□□□□ -0.05
LMO3-213ENST00000536172 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
LMO3-213ENST00000536172 PNMA8AQ86V59 439 aaPredicted RBP14.71□□□□□ -0.05
LMO3-213ENST00000536172 PNNQ9H307 717 aaKnown RBP14.71□□□□□ -0.05
LMO3-213ENST00000536172 TAF1DQ9H5J8 278 aaPredicted RBP14.71□□□□□ -0.05
LMO3-213ENST00000536172 PASKQ96RG2 1323 aa14.7□□□□□ -0.06
LMO3-213ENST00000536172 RIC1Q4ADV7 1423 aa14.7□□□□□ -0.06
LMO3-213ENST00000536172 CRY2Q49AN0 593 aa14.7□□□□□ -0.06
LMO3-213ENST00000536172 PSMD1Q99460 953 aa14.7□□□□□ -0.06
LMO3-213ENST00000536172 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
LMO3-213ENST00000536172 IBTKQ9P2D0 1353 aaPredicted RBP14.7□□□□□ -0.06
LMO3-213ENST00000536172 FZD9O00144 591 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 POTEIP0CG38 1075 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
LMO3-213ENST00000536172 KIF6Q6ZMV9 814 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 JDP2Q8WYK2 163 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
LMO3-213ENST00000536172 CNTNAP1P78357 1384 aa14.69□□□□□ -0.06
LMO3-213ENST00000536172 MAP3K15Q6ZN16 1313 aa14.68□□□□□ -0.06
LMO3-213ENST00000536172 ADAMTSL1Q8N6G6 1762 aa14.68□□□□□ -0.06
LMO3-213ENST00000536172 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
LMO3-213ENST00000536172 HLFQ16534 295 aa14.68□□□□□ -0.06
LMO3-213ENST00000536172 GPC2Q8N158 579 aa14.68□□□□□ -0.06
LMO3-213ENST00000536172 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
LMO3-213ENST00000536172 FAM177BA6PVY3 158 aa14.67□□□□□ -0.06
LMO3-213ENST00000536172 EPHX2P34913 555 aa14.67□□□□□ -0.06
LMO3-213ENST00000536172 SYNE4Q8N205 404 aa14.67□□□□□ -0.06
LMO3-213ENST00000536172 RPGRQ92834 1020 aaKnown RBP14.67□□□□□ -0.06
LMO3-213ENST00000536172 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
LMO3-213ENST00000536172 ZNF541Q9H0D2 1346 aa14.66□□□□□ -0.06
LMO3-213ENST00000536172 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
LMO3-213ENST00000536172 HOXA10P31260 410 aaPredicted RBP14.66□□□□□ -0.06
LMO3-213ENST00000536172 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
LMO3-213ENST00000536172 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
LMO3-213ENST00000536172 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
LMO3-213ENST00000536172 SNED1Q8TER0 1413 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms