RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MAP3K15Q6ZN16 1313 aa20.61■□□□□ 0.89
VAMP1-205ENST00000535927 G2E3Q7L622 706 aa20.61■□□□□ 0.89
VAMP1-205ENST00000535927 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
VAMP1-205ENST00000535927 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
VAMP1-205ENST00000535927 FRAT1Q92837 279 aaPredicted RBP20.61■□□□□ 0.89
VAMP1-205ENST00000535927 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
VAMP1-205ENST00000535927 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
VAMP1-205ENST00000535927 QSER1Q2KHR3 1735 aa20.61■□□□□ 0.89
VAMP1-205ENST00000535927 ZPR1O75312 459 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 ANXA1P04083 346 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 YY1P25490 414 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 RFC4P35249 363 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 DZIP1LQ8IYY4 767 aaKnown RBP20.6■□□□□ 0.89
VAMP1-205ENST00000535927 DNAAF4Q8WXU2 420 aa20.6■□□□□ 0.89
VAMP1-205ENST00000535927 NUP188Q5SRE5 1749 aa20.59■□□□□ 0.89
VAMP1-205ENST00000535927 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
VAMP1-205ENST00000535927 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
VAMP1-205ENST00000535927 CCT4P50991 539 aaKnown RBP20.59■□□□□ 0.89
VAMP1-205ENST00000535927 AIMP1Q12904 312 aaKnown RBP20.59■□□□□ 0.89
VAMP1-205ENST00000535927 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
VAMP1-205ENST00000535927 GIGYF2Q6Y7W6 1299 aaKnown RBP20.59■□□□□ 0.89
VAMP1-205ENST00000535927 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
VAMP1-205ENST00000535927 PXDNLA1KZ92 1463 aa20.58■□□□□ 0.89
VAMP1-205ENST00000535927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
VAMP1-205ENST00000535927 TRIM27P14373 513 aa20.58■□□□□ 0.89
VAMP1-205ENST00000535927 AAMPQ13685 434 aa20.58■□□□□ 0.89
VAMP1-205ENST00000535927 FTSJ3Q8IY81 847 aaKnown RBP20.58■□□□□ 0.89
VAMP1-205ENST00000535927 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
VAMP1-205ENST00000535927 METTL22Q9BUU2 404 aaPredicted RBP20.58■□□□□ 0.89
VAMP1-205ENST00000535927 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
VAMP1-205ENST00000535927 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
VAMP1-205ENST00000535927 PPP1R1BQ9UD71 204 aaPredicted RBP20.57■□□□□ 0.88
VAMP1-205ENST00000535927 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
VAMP1-205ENST00000535927 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
VAMP1-205ENST00000535927 ABCC4O15439 1325 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 ATP10DQ9P241 1426 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
VAMP1-205ENST00000535927 TCIRG1Q13488 830 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 TTLL7Q6ZT98 887 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 LINS1Q8NG48 757 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 SLC16A10Q8TF71 515 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
VAMP1-205ENST00000535927 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
VAMP1-205ENST00000535927 ZNF827Q17R98 1081 aa20.55■□□□□ 0.88
VAMP1-205ENST00000535927 ARXQ96QS3 562 aa20.55■□□□□ 0.88
VAMP1-205ENST00000535927 ADCY9O60503 1353 aa20.55■□□□□ 0.88
VAMP1-205ENST00000535927 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
VAMP1-205ENST00000535927 SPON1Q9HCB6 807 aa20.54■□□□□ 0.88
VAMP1-205ENST00000535927 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
VAMP1-205ENST00000535927 NUP98P52948 1817 aa20.53■□□□□ 0.88
VAMP1-205ENST00000535927 PARP10Q53GL7 1025 aa20.53■□□□□ 0.88
VAMP1-205ENST00000535927 NLGN1Q8N2Q7 840 aa20.53■□□□□ 0.88
VAMP1-205ENST00000535927 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
VAMP1-205ENST00000535927 SRCIN1Q9C0H9 1055 aa20.53■□□□□ 0.88
VAMP1-205ENST00000535927 BEND3Q5T5X7 828 aa20.52■□□□□ 0.88
VAMP1-205ENST00000535927 DDX19BQ9UMR2 479 aa20.52■□□□□ 0.88
VAMP1-205ENST00000535927 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
VAMP1-205ENST00000535927 ISCA1Q9BUE6 129 aa20.51■□□□□ 0.87
VAMP1-205ENST00000535927 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
VAMP1-205ENST00000535927 BCORQ6W2J9 1755 aa20.51■□□□□ 0.87
VAMP1-205ENST00000535927 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
VAMP1-205ENST00000535927 PNPLA7Q6ZV29 1317 aa20.51■□□□□ 0.87
VAMP1-205ENST00000535927 F6X3S4 739 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 PLIN1O60240 522 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 PHF14O94880 888 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 NEFLP07196 543 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 HSP90B1P14625 803 aaKnown RBP20.5■□□□□ 0.87
VAMP1-205ENST00000535927 ERICH6BQ5W0A0 696 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 COL23A1Q86Y22 540 aaPredicted RBP20.5■□□□□ 0.87
VAMP1-205ENST00000535927 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
VAMP1-205ENST00000535927 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
VAMP1-205ENST00000535927 SCN7AQ01118 1682 aa20.49■□□□□ 0.87
VAMP1-205ENST00000535927 MVPQ14764 893 aaKnown RBP20.49■□□□□ 0.87
VAMP1-205ENST00000535927 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
VAMP1-205ENST00000535927 HLFQ16534 295 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 PPP1R42Q7Z4L9 355 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 CLUAP1Q96AJ1 413 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 MYD88Q99836 296 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 CWC25Q9NXE8 425 aaPredicted RBP20.48■□□□□ 0.87
VAMP1-205ENST00000535927 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 TUBGCP6Q96RT7 1819 aa20.48■□□□□ 0.87
VAMP1-205ENST00000535927 NEURL1BA8MQ27 555 aa20.47■□□□□ 0.87
VAMP1-205ENST00000535927 GNAI3P08754 354 aa20.47■□□□□ 0.87
VAMP1-205ENST00000535927 GYS1P13807 737 aa20.47■□□□□ 0.87
VAMP1-205ENST00000535927 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
VAMP1-205ENST00000535927 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
VAMP1-205ENST00000535927 AMIGO3Q86WK7 504 aa20.46■□□□□ 0.87
VAMP1-205ENST00000535927 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
VAMP1-205ENST00000535927 MSH5O43196 834 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 IGKV5-2P06315 115 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 RLBP1P12271 317 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 GCKRQ14397 625 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 PANK1Q8TE04 598 aa20.45■□□□□ 0.86
VAMP1-205ENST00000535927 NIP7Q9Y221 180 aaKnown RBP eCLIP20.45■□□□□ 0.86
VAMP1-205ENST00000535927 UTYO14607 1347 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms