RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PCBP4P57723 403 aaKnown RBP10.47□□□□□ -0.73
VBP1-203ENST00000535916 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
VBP1-203ENST00000535916 TSPAN10Q9H1Z9 355 aaPredicted RBP10.47□□□□□ -0.73
VBP1-203ENST00000535916 SUV39H2Q9H5I1 410 aa10.47□□□□□ -0.73
VBP1-203ENST00000535916 MARK1Q9P0L2 795 aa10.47□□□□□ -0.73
VBP1-203ENST00000535916 PROCP04070 461 aa10.46□□□□□ -0.73
VBP1-203ENST00000535916 GRIN2CQ14957 1233 aa10.46□□□□□ -0.73
VBP1-203ENST00000535916 KRTAP1-3Q8IUG1 177 aa10.46□□□□□ -0.73
VBP1-203ENST00000535916 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
VBP1-203ENST00000535916 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
VBP1-203ENST00000535916 AVENQ9NQS1 362 aaPredicted RBP10.46□□□□□ -0.73
VBP1-203ENST00000535916 PRR12Q9ULL5 1215 aa10.46□□□□□ -0.73
VBP1-203ENST00000535916 DGKGP49619 791 aa10.45□□□□□ -0.74
VBP1-203ENST00000535916 ZNF468Q5VIY5 522 aaPredicted RBP10.45□□□□□ -0.74
VBP1-203ENST00000535916 CHSY3Q70JA7 882 aa10.45□□□□□ -0.74
VBP1-203ENST00000535916 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
VBP1-203ENST00000535916 LARGE2Q8N3Y3 721 aa10.45□□□□□ -0.74
VBP1-203ENST00000535916 GLMNQ92990 594 aa10.45□□□□□ -0.74
VBP1-203ENST00000535916 ZNF594Q96JF6 807 aaPredicted RBP10.45□□□□□ -0.74
VBP1-203ENST00000535916 PALM3A6NDB9 673 aaPredicted RBP10.44□□□□□ -0.74
VBP1-203ENST00000535916 SFI1A8K8P3 1242 aa10.44□□□□□ -0.74
VBP1-203ENST00000535916 PSMA6P60900 246 aaKnown RBP10.44□□□□□ -0.74
VBP1-203ENST00000535916 LAMC2Q13753 1193 aa10.44□□□□□ -0.74
VBP1-203ENST00000535916 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
VBP1-203ENST00000535916 SIX5Q8N196 739 aa10.44□□□□□ -0.74
VBP1-203ENST00000535916 GNB5O14775 395 aa10.43□□□□□ -0.74
VBP1-203ENST00000535916 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
VBP1-203ENST00000535916 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
VBP1-203ENST00000535916 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
VBP1-203ENST00000535916 GPC6Q9Y625 555 aaPredicted RBP10.43□□□□□ -0.74
VBP1-203ENST00000535916 M0R2N6 131 aa10.42□□□□□ -0.74
VBP1-203ENST00000535916 DKK1O94907 266 aa10.42□□□□□ -0.74
VBP1-203ENST00000535916 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
VBP1-203ENST00000535916 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
VBP1-203ENST00000535916 HCN4Q9Y3Q4 1203 aa10.42□□□□□ -0.74
VBP1-203ENST00000535916 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
VBP1-203ENST00000535916 POTEAQ6S8J7 498 aa10.4□□□□□ -0.74
VBP1-203ENST00000535916 HSH2DQ96JZ2 352 aa10.4□□□□□ -0.74
VBP1-203ENST00000535916 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
VBP1-203ENST00000535916 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.74
VBP1-203ENST00000535916 PIK3R2O00459 728 aa10.39□□□□□ -0.75
VBP1-203ENST00000535916 RASA1P20936 1047 aa10.39□□□□□ -0.75
VBP1-203ENST00000535916 HIRAP54198 1017 aaPredicted RBP10.39□□□□□ -0.75
VBP1-203ENST00000535916 SYT9Q86SS6 491 aa10.39□□□□□ -0.75
VBP1-203ENST00000535916 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
VBP1-203ENST00000535916 C21orf2O43822 256 aa10.38□□□□□ -0.75
VBP1-203ENST00000535916 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
VBP1-203ENST00000535916 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
VBP1-203ENST00000535916 SLC30A3Q99726 388 aa10.38□□□□□ -0.75
VBP1-203ENST00000535916 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
VBP1-203ENST00000535916 Q8N3U1 123 aa10.36□□□□□ -0.75
VBP1-203ENST00000535916 ZNF280CQ8ND82 737 aa10.36□□□□□ -0.75
VBP1-203ENST00000535916 MDFIQ99750 246 aa10.36□□□□□ -0.75
VBP1-203ENST00000535916 NOP53Q9NZM5 478 aaKnown RBP10.36□□□□□ -0.75
VBP1-203ENST00000535916 ELOA3CA0A087WX78 387 aaPredicted RBP10.35□□□□□ -0.75
VBP1-203ENST00000535916 ELOA3DA6NLF2 546 aaPredicted RBP10.35□□□□□ -0.75
VBP1-203ENST00000535916 SEC13P55735 322 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 ELOA3BQ3SY89 546 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 ELOA3Q8NG57 546 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 BRD7Q9NPI1 651 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
VBP1-203ENST00000535916 SIN3BO75182 1162 aa10.34□□□□□ -0.75
VBP1-203ENST00000535916 BAG6P46379 1132 aa10.34□□□□□ -0.75
VBP1-203ENST00000535916 SPEM2Q0P670 501 aa10.34□□□□□ -0.75
VBP1-203ENST00000535916 RAB44Q7Z6P3 723 aaPredicted RBP10.34□□□□□ -0.75
VBP1-203ENST00000535916 SCG3Q8WXD2 468 aaKnown RBP10.34□□□□□ -0.75
VBP1-203ENST00000535916 SUSD3Q96L08 255 aa10.34□□□□□ -0.75
VBP1-203ENST00000535916 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
VBP1-203ENST00000535916 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
VBP1-203ENST00000535916 C1QTNF9BB2RNN3 333 aa10.33□□□□□ -0.76
VBP1-203ENST00000535916 TYRO3Q06418 890 aa10.33□□□□□ -0.76
VBP1-203ENST00000535916 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
VBP1-203ENST00000535916 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
VBP1-203ENST00000535916 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
VBP1-203ENST00000535916 C2orf49Q9BVC5 232 aaPredicted RBP10.33□□□□□ -0.76
VBP1-203ENST00000535916 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
VBP1-203ENST00000535916 A6NJR5 290 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 ADARB2-AS1A8MUL3 147 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 LGR5O75473 907 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 ALAS2P22557 587 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
VBP1-203ENST00000535916 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
VBP1-203ENST00000535916 CHRNA4P43681 627 aa10.31□□□□□ -0.76
VBP1-203ENST00000535916 DPYDQ12882 1025 aa10.31□□□□□ -0.76
VBP1-203ENST00000535916 PTK7Q13308 1070 aa10.31□□□□□ -0.76
VBP1-203ENST00000535916 KANK4Q5T7N3 995 aaPredicted RBP10.31□□□□□ -0.76
VBP1-203ENST00000535916 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
VBP1-203ENST00000535916 PLVAPQ9BX97 442 aa10.31□□□□□ -0.76
VBP1-203ENST00000535916 KCNQ4P56696 695 aa10.3□□□□□ -0.76
VBP1-203ENST00000535916 TNFRSF25Q93038 417 aa10.3□□□□□ -0.76
VBP1-203ENST00000535916 KCNH4Q9UQ05 1017 aa10.3□□□□□ -0.76
VBP1-203ENST00000535916 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
VBP1-203ENST00000535916 GAS2L2Q8NHY3 880 aa10.29□□□□□ -0.76
VBP1-203ENST00000535916 HINFPQ9BQA5 517 aa10.29□□□□□ -0.76
VBP1-203ENST00000535916 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
VBP1-203ENST00000535916 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms