RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
UBB-204ENST00000535788 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
UBB-204ENST00000535788 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
UBB-204ENST00000535788 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
UBB-204ENST00000535788 PLEKHF1Q96S99 279 aa12.15□□□□□ -0.46
UBB-204ENST00000535788 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
UBB-204ENST00000535788 MAPK8IP3Q9UPT6 1336 aa12.14□□□□□ -0.47
UBB-204ENST00000535788 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
UBB-204ENST00000535788 FOXN1O15353 648 aa12.14□□□□□ -0.47
UBB-204ENST00000535788 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
UBB-204ENST00000535788 RFC4P35249 363 aa12.14□□□□□ -0.47
UBB-204ENST00000535788 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
UBB-204ENST00000535788 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
UBB-204ENST00000535788 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
UBB-204ENST00000535788 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
UBB-204ENST00000535788 APBB1O00213 710 aa12.13□□□□□ -0.47
UBB-204ENST00000535788 KCNQ3O43525 872 aa12.13□□□□□ -0.47
UBB-204ENST00000535788 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
UBB-204ENST00000535788 KCNA3P22001 575 aa12.13□□□□□ -0.47
UBB-204ENST00000535788 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
UBB-204ENST00000535788 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
UBB-204ENST00000535788 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
UBB-204ENST00000535788 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
UBB-204ENST00000535788 GYS1P13807 737 aa12.12□□□□□ -0.47
UBB-204ENST00000535788 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
UBB-204ENST00000535788 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
UBB-204ENST00000535788 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
UBB-204ENST00000535788 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
UBB-204ENST00000535788 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
UBB-204ENST00000535788 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
UBB-204ENST00000535788 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
UBB-204ENST00000535788 COL15A1P39059 1388 aa12.11□□□□□ -0.47
UBB-204ENST00000535788 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
UBB-204ENST00000535788 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
UBB-204ENST00000535788 STARD3NLO95772 234 aa12.11□□□□□ -0.47
UBB-204ENST00000535788 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBB-204ENST00000535788 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
UBB-204ENST00000535788 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
UBB-204ENST00000535788 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 CWC22Q9HCG8 908 aaKnown RBP12.1□□□□□ -0.47
UBB-204ENST00000535788 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
UBB-204ENST00000535788 KIF13BQ9NQT8 1826 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 RASSF7Q02833 373 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
UBB-204ENST00000535788 CERS3Q8IU89 383 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
UBB-204ENST00000535788 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 C10orf71Q711Q0 1435 aa12.09□□□□□ -0.47
UBB-204ENST00000535788 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
UBB-204ENST00000535788 ZPR1O75312 459 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 CHRNA5P30532 468 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 AIDAQ96BJ3 306 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
UBB-204ENST00000535788 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 GLTPD2A6NH11 291 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 LBX1P52954 281 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 RIPK4P57078 832 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 ABHD8Q96I13 439 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 NARFQ9UHQ1 456 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
UBB-204ENST00000535788 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
UBB-204ENST00000535788 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 A1BGP04217 495 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 SNRPA1P09661 255 aaKnown RBP12.06□□□□□ -0.48
UBB-204ENST00000535788 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
UBB-204ENST00000535788 DDR1Q08345 913 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
UBB-204ENST00000535788 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 SBF1O95248 1867 aa12.06□□□□□ -0.48
UBB-204ENST00000535788 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 A0A087WZG4 1122 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 CCDC85CA6NKD9 419 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
UBB-204ENST00000535788 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
UBB-204ENST00000535788 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
UBB-204ENST00000535788 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
UBB-204ENST00000535788 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
UBB-204ENST00000535788 NFIXQ14938 502 aa12.04□□□□□ -0.48
UBB-204ENST00000535788 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
UBB-204ENST00000535788 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
UBB-204ENST00000535788 POTECB2RU33 542 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms