RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 MTHFSP49914 203 aa14.95□□□□□ -0.02
VAMP1-204ENST00000535180 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
VAMP1-204ENST00000535180 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
VAMP1-204ENST00000535180 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
VAMP1-204ENST00000535180 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
VAMP1-204ENST00000535180 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
VAMP1-204ENST00000535180 GPC2Q8N158 579 aa14.94□□□□□ -0.02
VAMP1-204ENST00000535180 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
VAMP1-204ENST00000535180 FZD9O00144 591 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 SRGNP10124 158 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 SAPCD2Q86UD0 394 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 ZBTB1Q9Y2K1 713 aa14.93□□□□□ -0.02
VAMP1-204ENST00000535180 FKBP4Q02790 459 aaKnown RBP eCLIP14.92□□□□□ -0.02
VAMP1-204ENST00000535180 AMOTQ4VCS5 1084 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 CCDC93Q567U6 631 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 TBC1D9BQ66K14 1250 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 MASTLQ96GX5 879 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 HHIPL1Q96JK4 782 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 ZNF277Q9NRM2 450 aaPredicted RBP14.92□□□□□ -0.02
VAMP1-204ENST00000535180 SCN7AQ01118 1682 aa14.92□□□□□ -0.02
VAMP1-204ENST00000535180 BCORQ6W2J9 1755 aa14.91□□□□□ -0.02
VAMP1-204ENST00000535180 TRAF5O00463 557 aa14.91□□□□□ -0.02
VAMP1-204ENST00000535180 EIF4A2Q14240 407 aaKnown RBP14.91□□□□□ -0.02
VAMP1-204ENST00000535180 CIAPIN1Q6FI81 312 aa14.91□□□□□ -0.02
VAMP1-204ENST00000535180 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
VAMP1-204ENST00000535180 C1orf141Q5JVX7 400 aa14.9□□□□□ -0.02
VAMP1-204ENST00000535180 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
VAMP1-204ENST00000535180 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
VAMP1-204ENST00000535180 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
VAMP1-204ENST00000535180 A0A087WZG4 1122 aa14.88□□□□□ -0.03
VAMP1-204ENST00000535180 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-204ENST00000535180 IARSP41252 1262 aaKnown RBP14.88□□□□□ -0.03
VAMP1-204ENST00000535180 USP50Q70EL3 339 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-204ENST00000535180 RTKN2Q8IZC4 609 aa14.88□□□□□ -0.03
VAMP1-204ENST00000535180 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
VAMP1-204ENST00000535180 EIF5P55010 431 aaKnown RBP14.87□□□□□ -0.03
VAMP1-204ENST00000535180 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
VAMP1-204ENST00000535180 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
VAMP1-204ENST00000535180 CELF2O95319 508 aaKnown RBP14.86□□□□□ -0.03
VAMP1-204ENST00000535180 EPS15P42566 896 aa14.86□□□□□ -0.03
VAMP1-204ENST00000535180 ST5P78524 1137 aa14.86□□□□□ -0.03
VAMP1-204ENST00000535180 NOGQ13253 232 aa14.86□□□□□ -0.03
VAMP1-204ENST00000535180 CARD14Q9BXL6 1004 aa14.86□□□□□ -0.03
VAMP1-204ENST00000535180 NPHP1O15259 732 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 SCNN1DP51172 638 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 GJA3Q9Y6H8 435 aa14.85□□□□□ -0.03
VAMP1-204ENST00000535180 EIF6P56537 245 aaKnown RBP14.84□□□□□ -0.03
VAMP1-204ENST00000535180 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 OLFM4Q6UX06 510 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 SAGE1Q9NXZ1 904 aa14.84□□□□□ -0.03
VAMP1-204ENST00000535180 NPR1P16066 1061 aa14.83□□□□□ -0.04
VAMP1-204ENST00000535180 COL4A5P29400 1685 aa14.82□□□□□ -0.04
VAMP1-204ENST00000535180 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
VAMP1-204ENST00000535180 TBC1D2BQ9UPU7 963 aa14.82□□□□□ -0.04
VAMP1-204ENST00000535180 MRC1P22897 1456 aa14.82□□□□□ -0.04
VAMP1-204ENST00000535180 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
VAMP1-204ENST00000535180 PSMD1Q99460 953 aa14.81□□□□□ -0.04
VAMP1-204ENST00000535180 POLR2AP24928 1970 aaKnown RBP14.81□□□□□ -0.04
VAMP1-204ENST00000535180 KLRG2A4D1S0 409 aaPredicted RBP14.8□□□□□ -0.04
VAMP1-204ENST00000535180 STARD3NLO95772 234 aa14.8□□□□□ -0.04
VAMP1-204ENST00000535180 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
VAMP1-204ENST00000535180 SNED1Q8TER0 1413 aa14.8□□□□□ -0.04
VAMP1-204ENST00000535180 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
VAMP1-204ENST00000535180 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
VAMP1-204ENST00000535180 GLIS2Q9BZE0 524 aaPredicted RBP14.79□□□□□ -0.04
VAMP1-204ENST00000535180 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
VAMP1-204ENST00000535180 ADARB2Q9NS39 739 aaKnown RBP14.79□□□□□ -0.04
VAMP1-204ENST00000535180 TRPA1O75762 1119 aa14.78□□□□□ -0.04
VAMP1-204ENST00000535180 ZNF408Q9H9D4 720 aa14.78□□□□□ -0.04
VAMP1-204ENST00000535180 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
VAMP1-204ENST00000535180 PGAP2Q9UHJ9 254 aa14.78□□□□□ -0.04
VAMP1-204ENST00000535180 ALDH1B1P30837 517 aa14.77□□□□□ -0.05
VAMP1-204ENST00000535180 IL6STP40189 918 aaPredicted RBP14.77□□□□□ -0.05
VAMP1-204ENST00000535180 GPRC5DQ9NZD1 345 aa14.77□□□□□ -0.05
VAMP1-204ENST00000535180 ZNF330Q9Y3S2 320 aaPredicted RBP14.77□□□□□ -0.05
VAMP1-204ENST00000535180 FAM155AB1AL88 458 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-204ENST00000535180 CAMTA2O94983 1202 aa14.76□□□□□ -0.05
VAMP1-204ENST00000535180 HUNKP57058 714 aa14.76□□□□□ -0.05
VAMP1-204ENST00000535180 PKN2Q16513 984 aaKnown RBP14.76□□□□□ -0.05
VAMP1-204ENST00000535180 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
VAMP1-204ENST00000535180 NBPF5PQ86XG9 351 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-204ENST00000535180 RNMTO43148 476 aaKnown RBP14.75□□□□□ -0.05
VAMP1-204ENST00000535180 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-204ENST00000535180 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
VAMP1-204ENST00000535180 DLL1O00548 723 aa14.74□□□□□ -0.05
VAMP1-204ENST00000535180 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-204ENST00000535180 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
VAMP1-204ENST00000535180 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
VAMP1-204ENST00000535180 CDC37L1Q7L3B6 337 aa14.74□□□□□ -0.05
VAMP1-204ENST00000535180 LARGE2Q8N3Y3 721 aa14.74□□□□□ -0.05
VAMP1-204ENST00000535180 ZC3H15Q8WU90 426 aaKnown RBP14.74□□□□□ -0.05
VAMP1-204ENST00000535180 TEX13AQ9BXU3 409 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms