RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
MSRB3-204ENST00000535143 ST5P78524 1137 aa23.02■■□□□ 1.28
MSRB3-204ENST00000535143 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
MSRB3-204ENST00000535143 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
MSRB3-204ENST00000535143 LTBP3Q9NS15 1303 aa23.02■■□□□ 1.28
MSRB3-204ENST00000535143 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
MSRB3-204ENST00000535143 CNKSR1Q969H4 720 aa23.01■■□□□ 1.27
MSRB3-204ENST00000535143 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
MSRB3-204ENST00000535143 SRGNP10124 158 aa23■■□□□ 1.27
MSRB3-204ENST00000535143 STYK1Q6J9G0 422 aa23■■□□□ 1.27
MSRB3-204ENST00000535143 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
MSRB3-204ENST00000535143 CREBZFQ9NS37 354 aa23■■□□□ 1.27
MSRB3-204ENST00000535143 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
MSRB3-204ENST00000535143 MASTLQ96GX5 879 aa22.99■■□□□ 1.27
MSRB3-204ENST00000535143 BTBD11A6QL63 1104 aa22.98■■□□□ 1.27
MSRB3-204ENST00000535143 USP16Q9Y5T5 823 aa22.98■■□□□ 1.27
MSRB3-204ENST00000535143 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
MSRB3-204ENST00000535143 SCN4AP35499 1836 aa22.97■■□□□ 1.27
MSRB3-204ENST00000535143 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
MSRB3-204ENST00000535143 OLFM4Q6UX06 510 aa22.96■■□□□ 1.27
MSRB3-204ENST00000535143 NBPF5PQ86XG9 351 aaPredicted RBP22.96■■□□□ 1.27
MSRB3-204ENST00000535143 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
MSRB3-204ENST00000535143 PRKAR2BP31323 418 aa22.95■■□□□ 1.26
MSRB3-204ENST00000535143 CNTNAP1P78357 1384 aa22.95■■□□□ 1.26
MSRB3-204ENST00000535143 PASKQ96RG2 1323 aa22.94■■□□□ 1.26
MSRB3-204ENST00000535143 FAM177BA6PVY3 158 aa22.94■■□□□ 1.26
MSRB3-204ENST00000535143 FOXN1O15353 648 aa22.94■■□□□ 1.26
MSRB3-204ENST00000535143 SOGA3Q5TF21 947 aa22.94■■□□□ 1.26
MSRB3-204ENST00000535143 TAF1DQ9H5J8 278 aaPredicted RBP22.94■■□□□ 1.26
MSRB3-204ENST00000535143 ZNF277Q9NRM2 450 aaPredicted RBP22.94■■□□□ 1.26
MSRB3-204ENST00000535143 CCDC93Q567U6 631 aa22.93■■□□□ 1.26
MSRB3-204ENST00000535143 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
MSRB3-204ENST00000535143 IQCA1LA6NCM1 817 aa22.92■■□□□ 1.26
MSRB3-204ENST00000535143 LDHDQ86WU2 507 aa22.92■■□□□ 1.26
MSRB3-204ENST00000535143 C7orf43Q8WVR3 580 aa22.92■■□□□ 1.26
MSRB3-204ENST00000535143 L3MBTL3Q96JM7 780 aaPredicted RBP22.91■■□□□ 1.26
MSRB3-204ENST00000535143 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
MSRB3-204ENST00000535143 NPR1P16066 1061 aa22.9■■□□□ 1.26
MSRB3-204ENST00000535143 MCM10Q7L590 875 aa22.9■■□□□ 1.26
MSRB3-204ENST00000535143 ADAMTSL1Q8N6G6 1762 aa22.89■■□□□ 1.26
MSRB3-204ENST00000535143 FKBP4Q02790 459 aaKnown RBP eCLIP22.89■■□□□ 1.25
MSRB3-204ENST00000535143 NIP7Q9Y221 180 aaKnown RBP eCLIP22.89■■□□□ 1.25
MSRB3-204ENST00000535143 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
MSRB3-204ENST00000535143 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.25
MSRB3-204ENST00000535143 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 VEGFBP49765 207 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
MSRB3-204ENST00000535143 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
MSRB3-204ENST00000535143 SNRPA1P09661 255 aaKnown RBP22.87■■□□□ 1.25
MSRB3-204ENST00000535143 CLEC4GQ6UXB4 293 aa22.87■■□□□ 1.25
MSRB3-204ENST00000535143 HACL1Q9UJ83 578 aa22.87■■□□□ 1.25
MSRB3-204ENST00000535143 TMEM88BA6NKF7 163 aa22.86■■□□□ 1.25
MSRB3-204ENST00000535143 ITGBL1O95965 494 aaPredicted RBP22.86■■□□□ 1.25
MSRB3-204ENST00000535143 EPHX2P34913 555 aa22.85■■□□□ 1.25
MSRB3-204ENST00000535143 HLFQ16534 295 aa22.85■■□□□ 1.25
MSRB3-204ENST00000535143 LAMB4A4D0S4 1761 aa22.85■■□□□ 1.25
MSRB3-204ENST00000535143 KLRG2A4D1S0 409 aaPredicted RBP22.84■■□□□ 1.25
MSRB3-204ENST00000535143 MAP1SQ66K74 1059 aaPredicted RBP22.84■■□□□ 1.25
MSRB3-204ENST00000535143 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
MSRB3-204ENST00000535143 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
MSRB3-204ENST00000535143 AIDAQ96BJ3 306 aa22.84■■□□□ 1.25
MSRB3-204ENST00000535143 ABCC12Q96J65 1359 aa22.84■■□□□ 1.25
MSRB3-204ENST00000535143 IARSP41252 1262 aaKnown RBP22.83■■□□□ 1.25
MSRB3-204ENST00000535143 SYNE4Q8N205 404 aa22.83■■□□□ 1.25
MSRB3-204ENST00000535143 CFAP53Q96M91 514 aa22.83■■□□□ 1.25
MSRB3-204ENST00000535143 COL4A5P29400 1685 aa22.82■■□□□ 1.24
MSRB3-204ENST00000535143 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
MSRB3-204ENST00000535143 CTCFP49711 727 aaPredicted RBP22.82■■□□□ 1.24
MSRB3-204ENST00000535143 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
MSRB3-204ENST00000535143 SLC51AQ86UW1 340 aa22.82■■□□□ 1.24
MSRB3-204ENST00000535143 PRDM10Q9NQV6 1147 aa22.82■■□□□ 1.24
MSRB3-204ENST00000535143 NUTM1Q86Y26 1132 aa22.81■■□□□ 1.24
MSRB3-204ENST00000535143 RTKN2Q8IZC4 609 aa22.81■■□□□ 1.24
MSRB3-204ENST00000535143 NGEFQ8N5V2 710 aa22.81■■□□□ 1.24
MSRB3-204ENST00000535143 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
MSRB3-204ENST00000535143 LTBP1Q14766 1721 aa22.81■■□□□ 1.24
MSRB3-204ENST00000535143 NUP98P52948 1817 aa22.8■■□□□ 1.24
MSRB3-204ENST00000535143 FZD9O00144 591 aa22.8■■□□□ 1.24
MSRB3-204ENST00000535143 GTF2E1P29083 439 aaPredicted RBP22.8■■□□□ 1.24
MSRB3-204ENST00000535143 LBX1P52954 281 aa22.8■■□□□ 1.24
MSRB3-204ENST00000535143 CNTROBQ8N137 903 aa22.8■■□□□ 1.24
MSRB3-204ENST00000535143 SNED1Q8TER0 1413 aa22.8■■□□□ 1.24
MSRB3-204ENST00000535143 WBP1LQ9NX94 342 aa22.78■■□□□ 1.24
MSRB3-204ENST00000535143 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
MSRB3-204ENST00000535143 GJA3Q9Y6H8 435 aa22.78■■□□□ 1.24
MSRB3-204ENST00000535143 DLG5Q8TDM6 1919 aa22.77■■□□□ 1.24
MSRB3-204ENST00000535143 ALDH1B1P30837 517 aa22.77■■□□□ 1.24
MSRB3-204ENST00000535143 FMR1Q06787 632 aaKnown RBP eCLIP22.77■■□□□ 1.24
MSRB3-204ENST00000535143 PNMA8AQ86V59 439 aaPredicted RBP22.77■■□□□ 1.24
MSRB3-204ENST00000535143 ABT1Q9ULW3 272 aaKnown RBP22.77■■□□□ 1.24
MSRB3-204ENST00000535143 RASSF10A6NK89 507 aa22.76■■□□□ 1.23
MSRB3-204ENST00000535143 DEFB115Q30KQ5 88 aa22.76■■□□□ 1.23
MSRB3-204ENST00000535143 GPC2Q8N158 579 aa22.76■■□□□ 1.23
MSRB3-204ENST00000535143 KDM3BQ7LBC6 1761 aa22.76■■□□□ 1.23
MSRB3-204ENST00000535143 HSPA8P11142 646 aaKnown RBP22.75■■□□□ 1.23
MSRB3-204ENST00000535143 JDP2Q8WYK2 163 aa22.75■■□□□ 1.23
MSRB3-204ENST00000535143 TCERG1O14776 1098 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms