RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 INTS5Q6P9B9 1019 aaKnown RBP9.82□□□□□ -0.84
GEN1-207ENST00000534669 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
GEN1-207ENST00000534669 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
GEN1-207ENST00000534669 PLEKHG2Q9H7P9 1386 aa9.82□□□□□ -0.84
GEN1-207ENST00000534669 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
GEN1-207ENST00000534669 USP42Q9H9J4 1324 aaKnown RBP9.82□□□□□ -0.84
GEN1-207ENST00000534669 TNRC6CQ9HCJ0 1690 aaKnown RBP9.81□□□□□ -0.84
GEN1-207ENST00000534669 POTEMA6NI47 508 aa9.81□□□□□ -0.84
GEN1-207ENST00000534669 PRELPP51888 382 aa9.81□□□□□ -0.84
GEN1-207ENST00000534669 CABP4P57796 275 aa9.81□□□□□ -0.84
GEN1-207ENST00000534669 PLEKHO1Q53GL0 409 aaPredicted RBP9.81□□□□□ -0.84
GEN1-207ENST00000534669 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
GEN1-207ENST00000534669 TIAM2Q8IVF5 1701 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 POLRMTO00411 1230 aaKnown RBP9.8□□□□□ -0.84
GEN1-207ENST00000534669 MTHFSP49914 203 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 RASSF7Q02833 373 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 FBXO22Q8NEZ5 403 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 PANK3Q9H999 370 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
GEN1-207ENST00000534669 MRC1P22897 1456 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 UBR2Q8IWV8 1755 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
GEN1-207ENST00000534669 TM4SF1P30408 202 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 SULT6B1Q6IMI4 303 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
GEN1-207ENST00000534669 RNF181Q9P0P0 153 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 PIM2Q9P1W9 311 aa9.79□□□□□ -0.84
GEN1-207ENST00000534669 COL11A2P13942 1736 aaPredicted RBP9.79□□□□□ -0.84
GEN1-207ENST00000534669 CARMIL3Q8ND23 1372 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
GEN1-207ENST00000534669 IL13P35225 146 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
GEN1-207ENST00000534669 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 MICALL2Q8IY33 904 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 RRAGCQ9HB90 399 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
GEN1-207ENST00000534669 SOS1Q07889 1333 aaPredicted RBP9.78□□□□□ -0.84
GEN1-207ENST00000534669 SLC39A6Q13433 755 aa9.77□□□□□ -0.85
GEN1-207ENST00000534669 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
GEN1-207ENST00000534669 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
GEN1-207ENST00000534669 KLRG1Q96E93 195 aa9.77□□□□□ -0.85
GEN1-207ENST00000534669 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
GEN1-207ENST00000534669 NFIXQ14938 502 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 MORC1Q86VD1 984 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
GEN1-207ENST00000534669 ZBTB1Q9Y2K1 713 aa9.76□□□□□ -0.85
GEN1-207ENST00000534669 SIPA1L3O60292 1781 aaPredicted RBP9.75□□□□□ -0.85
GEN1-207ENST00000534669 SLC52A2Q9HAB3 445 aa9.75□□□□□ -0.85
GEN1-207ENST00000534669 PCNTO95613 3336 aa9.75□□□□□ -0.85
GEN1-207ENST00000534669 COL15A1P39059 1388 aa9.75□□□□□ -0.85
GEN1-207ENST00000534669 SCN7AQ01118 1682 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 DICER1Q9UPY3 1922 aaKnown RBP9.74□□□□□ -0.85
GEN1-207ENST00000534669 NFKBIEO00221 500 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
GEN1-207ENST00000534669 ST18O60284 1047 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 HMOX1P09601 288 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 FSTL1Q12841 308 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 AKAP4Q5JQC9 854 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 C16orf71Q8IYS4 520 aaPredicted RBP9.74□□□□□ -0.85
GEN1-207ENST00000534669 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 FER1L6Q2WGJ9 1857 aa9.74□□□□□ -0.85
GEN1-207ENST00000534669 POTECB2RU33 542 aa9.73□□□□□ -0.85
GEN1-207ENST00000534669 MTHFSDQ2M296 383 aaKnown RBP9.73□□□□□ -0.85
GEN1-207ENST00000534669 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
GEN1-207ENST00000534669 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
GEN1-207ENST00000534669 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
GEN1-207ENST00000534669 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
GEN1-207ENST00000534669 ZPR1O75312 459 aa9.72□□□□□ -0.85
GEN1-207ENST00000534669 SERPINB2P05120 415 aa9.72□□□□□ -0.85
GEN1-207ENST00000534669 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
GEN1-207ENST00000534669 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
GEN1-207ENST00000534669 SLX4Q8IY92 1834 aa9.72□□□□□ -0.85
GEN1-207ENST00000534669 BCORQ6W2J9 1755 aa9.71□□□□□ -0.85
GEN1-207ENST00000534669 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
GEN1-207ENST00000534669 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
GEN1-207ENST00000534669 C2CD5Q86YS7 1000 aa9.71□□□□□ -0.86
GEN1-207ENST00000534669 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
GEN1-207ENST00000534669 COL3A1P02461 1466 aaPredicted RBP9.71□□□□□ -0.86
GEN1-207ENST00000534669 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
GEN1-207ENST00000534669 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
GEN1-207ENST00000534669 LMNB1P20700 586 aa9.7□□□□□ -0.86
GEN1-207ENST00000534669 TBC1D9BQ66K14 1250 aa9.7□□□□□ -0.86
GEN1-207ENST00000534669 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
GEN1-207ENST00000534669 TTLL6Q8N841 843 aa9.69□□□□□ -0.86
GEN1-207ENST00000534669 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
GEN1-207ENST00000534669 KIF7Q2M1P5 1343 aa9.68□□□□□ -0.86
GEN1-207ENST00000534669 CLSPNQ9HAW4 1339 aa9.68□□□□□ -0.86
GEN1-207ENST00000534669 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
GEN1-207ENST00000534669 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
GEN1-207ENST00000534669 PRR5LQ6MZQ0 368 aa9.68□□□□□ -0.86
GEN1-207ENST00000534669 IL17REQ8NFR9 667 aa9.68□□□□□ -0.86
GEN1-207ENST00000534669 ZNF496Q96IT1 587 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 438.9 ms