RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 TRMT2AQ8IZ69 625 aaKnown RBP31.13■■■□□ 2.57
SIPA1-210ENST00000534406 STK31Q9BXU1 1019 aa31.13■■■□□ 2.57
SIPA1-210ENST00000534406 ZNF652Q9Y2D9 606 aa31.13■■■□□ 2.57
SIPA1-210ENST00000534406 RGL2O15211 777 aa31.12■■■□□ 2.57
SIPA1-210ENST00000534406 VAMP4O75379 141 aa31.12■■■□□ 2.57
SIPA1-210ENST00000534406 MAP3K15Q6ZN16 1313 aa31.12■■■□□ 2.57
SIPA1-210ENST00000534406 CACNA1FO60840 1977 aa31.11■■■□□ 2.57
SIPA1-210ENST00000534406 XAGE3Q8WTP9 111 aa31.11■■■□□ 2.57
SIPA1-210ENST00000534406 NUP98P52948 1817 aa31.1■■■□□ 2.57
SIPA1-210ENST00000534406 ERVV-1B6SEH8 477 aa31.09■■■□□ 2.57
SIPA1-210ENST00000534406 CLEC4GQ6UXB4 293 aa31.09■■■□□ 2.57
SIPA1-210ENST00000534406 COPS6Q7L5N1 327 aa31.09■■■□□ 2.57
SIPA1-210ENST00000534406 AIMP1Q12904 312 aaKnown RBP31.08■■■□□ 2.57
SIPA1-210ENST00000534406 NFIXQ14938 502 aa31.08■■■□□ 2.57
SIPA1-210ENST00000534406 ZBTB3Q9H5J0 574 aa31.08■■■□□ 2.57
SIPA1-210ENST00000534406 PARP3Q9Y6F1 533 aa31.08■■■□□ 2.57
SIPA1-210ENST00000534406 TCERG1O14776 1098 aaKnown RBP31.06■■■□□ 2.56
SIPA1-210ENST00000534406 TM4SF1P30408 202 aa31.06■■■□□ 2.56
SIPA1-210ENST00000534406 DDR1Q08345 913 aa31.06■■■□□ 2.56
SIPA1-210ENST00000534406 TBC1D9BQ66K14 1250 aa31.06■■■□□ 2.56
SIPA1-210ENST00000534406 HLFQ16534 295 aa31.05■■■□□ 2.56
SIPA1-210ENST00000534406 BICDL1Q6ZP65 573 aa31.05■■■□□ 2.56
SIPA1-210ENST00000534406 ATP10DQ9P241 1426 aa31.05■■■□□ 2.56
SIPA1-210ENST00000534406 CARMIL3Q8ND23 1372 aa31.05■■■□□ 2.56
SIPA1-210ENST00000534406 AFDNP55196 1824 aaKnown RBP31.04■■■□□ 2.56
SIPA1-210ENST00000534406 POLRMTO00411 1230 aaKnown RBP31.04■■■□□ 2.56
SIPA1-210ENST00000534406 ANKRD36CQ5JPF3 1778 aa31.04■■■□□ 2.56
SIPA1-210ENST00000534406 ARFGEF2Q9Y6D5 1785 aa31.04■■■□□ 2.56
SIPA1-210ENST00000534406 PHAXQ9H814 394 aaKnown RBP31.03■■■□□ 2.56
SIPA1-210ENST00000534406 NRXN2Q9P2S2 1712 aa31.03■■■□□ 2.56
SIPA1-210ENST00000534406 SETDB2Q96T68 719 aa31.02■■■□□ 2.56
SIPA1-210ENST00000534406 SLC4A2P04920 1241 aa31.01■■■□□ 2.55
SIPA1-210ENST00000534406 CT47B1P0C2W7 299 aaPredicted RBP31.01■■■□□ 2.55
SIPA1-210ENST00000534406 GIGYF2Q6Y7W6 1299 aaKnown RBP31.01■■■□□ 2.55
SIPA1-210ENST00000534406 PLBD2Q8NHP8 589 aa31.01■■■□□ 2.55
SIPA1-210ENST00000534406 C10orf71Q711Q0 1435 aa31■■■□□ 2.55
SIPA1-210ENST00000534406 KLHL34Q8N239 644 aa31■■■□□ 2.55
SIPA1-210ENST00000534406 ZNF428Q96B54 188 aa31■■■□□ 2.55
SIPA1-210ENST00000534406 NIP7Q9Y221 180 aaKnown RBP eCLIP31■■■□□ 2.55
SIPA1-210ENST00000534406 DDX58O95786 925 aaKnown RBP30.99■■■□□ 2.55
SIPA1-210ENST00000534406 ANKRD13DQ6ZTN6 518 aa30.99■■■□□ 2.55
SIPA1-210ENST00000534406 FHDC1Q9C0D6 1143 aaPredicted RBP30.99■■■□□ 2.55
SIPA1-210ENST00000534406 KIF13BQ9NQT8 1826 aa30.98■■■□□ 2.55
SIPA1-210ENST00000534406 SERPINB2P05120 415 aa30.97■■■□□ 2.55
SIPA1-210ENST00000534406 HSP90AB3PQ58FF7 597 aa30.97■■■□□ 2.55
SIPA1-210ENST00000534406 FLIIQ13045 1269 aa30.95■■■□□ 2.55
SIPA1-210ENST00000534406 G2E3Q7L622 706 aa30.95■■■□□ 2.55
SIPA1-210ENST00000534406 RIC3Q7Z5B4 369 aa30.95■■■□□ 2.55
SIPA1-210ENST00000534406 GPTP24298 496 aa30.94■■■□□ 2.54
SIPA1-210ENST00000534406 CD2APQ9Y5K6 639 aa30.94■■■□□ 2.54
SIPA1-210ENST00000534406 TCIRG1Q13488 830 aa30.93■■■□□ 2.54
SIPA1-210ENST00000534406 ZNF34Q8IZ26 560 aa30.93■■■□□ 2.54
SIPA1-210ENST00000534406 UBN2Q6ZU65 1347 aa30.93■■■□□ 2.54
SIPA1-210ENST00000534406 IBTKQ9P2D0 1353 aaPredicted RBP30.92■■■□□ 2.54
SIPA1-210ENST00000534406 NPHP1O15259 732 aa30.92■■■□□ 2.54
SIPA1-210ENST00000534406 ALDH1L2Q3SY69 923 aa30.92■■■□□ 2.54
SIPA1-210ENST00000534406 NBPF5PQ86XG9 351 aaPredicted RBP30.92■■■□□ 2.54
SIPA1-210ENST00000534406 CNBD1Q8NA66 436 aa30.92■■■□□ 2.54
SIPA1-210ENST00000534406 FKBP5Q13451 457 aaPredicted RBP30.91■■■□□ 2.54
SIPA1-210ENST00000534406 PARP10Q53GL7 1025 aa30.91■■■□□ 2.54
SIPA1-210ENST00000534406 SYT17Q9BSW7 474 aa30.91■■■□□ 2.54
SIPA1-210ENST00000534406 ADCY9O60503 1353 aa30.91■■■□□ 2.54
SIPA1-210ENST00000534406 KSR2Q6VAB6 950 aa30.9■■■□□ 2.54
SIPA1-210ENST00000534406 SSH1Q8WYL5 1049 aa30.9■■■□□ 2.54
SIPA1-210ENST00000534406 PRR5LQ6MZQ0 368 aa30.89■■■□□ 2.54
SIPA1-210ENST00000534406 YTHDC1Q96MU7 727 aaKnown RBP30.89■■■□□ 2.54
SIPA1-210ENST00000534406 SMC4Q9NTJ3 1288 aa30.89■■■□□ 2.54
SIPA1-210ENST00000534406 MAP3K2Q9Y2U5 619 aa30.89■■■□□ 2.54
SIPA1-210ENST00000534406 KIAA1551Q9HCM1 1747 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 PI4KAP2A4QPH2 592 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 FAM177BA6PVY3 158 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 MRPL50Q8N5N7 158 aaKnown RBP30.88■■■□□ 2.53
SIPA1-210ENST00000534406 PI4KAP1Q8N8J0 262 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 BCL2L13Q9BXK5 485 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 NYXQ9GZU5 481 aa30.88■■■□□ 2.53
SIPA1-210ENST00000534406 ANKRD31Q8N7Z5 1873 aa30.87■■■□□ 2.53
SIPA1-210ENST00000534406 ST5P78524 1137 aa30.87■■■□□ 2.53
SIPA1-210ENST00000534406 TPTE2Q6XPS3 522 aa30.86■■■□□ 2.53
SIPA1-210ENST00000534406 NLGN2Q8NFZ4 835 aa30.86■■■□□ 2.53
SIPA1-210ENST00000534406 METTL22Q9BUU2 404 aaPredicted RBP30.86■■■□□ 2.53
SIPA1-210ENST00000534406 PXDNLA1KZ92 1463 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 SUSD4Q5VX71 490 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 PPP1R42Q7Z4L9 355 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 NLRP10Q86W26 655 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 MYD88Q99836 296 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 ISCA1Q9BUE6 129 aa30.85■■■□□ 2.53
SIPA1-210ENST00000534406 ATP5J2-PTCD1G3V325 749 aa30.84■■■□□ 2.53
SIPA1-210ENST00000534406 RARSP54136 660 aaKnown RBP30.84■■■□□ 2.53
SIPA1-210ENST00000534406 NTSR2O95665 410 aa30.83■■■□□ 2.53
SIPA1-210ENST00000534406 GTF2E1P29083 439 aaPredicted RBP30.83■■■□□ 2.53
SIPA1-210ENST00000534406 N4BP2Q86UW6 1770 aaPredicted RBP30.83■■■□□ 2.53
SIPA1-210ENST00000534406 PTPRCP08575 1304 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 RNF123Q5XPI4 1314 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 TGFB2P61812 414 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 NEXNQ0ZGT2 675 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 CCDC24Q8N4L8 307 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 DNAAF4Q8WXU2 420 aa30.82■■■□□ 2.52
SIPA1-210ENST00000534406 UTP14AQ9BVJ6 771 aaKnown RBP30.82■■■□□ 2.52
SIPA1-210ENST00000534406 ABCC12Q96J65 1359 aa30.81■■■□□ 2.52
SIPA1-210ENST00000534406 TRIM28Q13263 835 aaKnown RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms