RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 PRKCSHP14314 528 aaPredicted RBP6.67□□□□□ -1.34
USP33-218ENST00000533928 MX2P20592 715 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 CENPCQ03188 943 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 NEDD1Q8NHV4 660 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 ACDQ96AP0 544 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 ESYT1Q9BSJ8 1104 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 NUCKS1Q9H1E3 243 aaKnown RBP6.67□□□□□ -1.34
USP33-218ENST00000533928 CEP126Q9P2H0 1117 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 CNTNAP5Q8WYK1 1306 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
USP33-218ENST00000533928 ATP7AQ04656 1500 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 MAST1Q9Y2H9 1570 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
USP33-218ENST00000533928 IL2RAP01589 272 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 FOXK2Q01167 660 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 BEND7Q8N7W2 519 aaPredicted RBP6.66□□□□□ -1.34
USP33-218ENST00000533928 CDCA7Q9BWT1 371 aaPredicted RBP6.66□□□□□ -1.34
USP33-218ENST00000533928 NSFL1CQ9UNZ2 370 aaKnown RBP6.66□□□□□ -1.34
USP33-218ENST00000533928 FER1L4A9Z1Z3 1794 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 NCOA2Q15596 1464 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 CCDC141Q6ZP82 1450 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 SHANK2Q9UPX8 1470 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 SYCP2Q9BX26 1530 aa6.66□□□□□ -1.34
USP33-218ENST00000533928 ABCA6Q8N139 1617 aa6.65□□□□□ -1.34
USP33-218ENST00000533928 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
USP33-218ENST00000533928 PHKA2P46019 1235 aa6.65□□□□□ -1.34
USP33-218ENST00000533928 RANGAP1P46060 587 aaPredicted RBP6.65□□□□□ -1.34
USP33-218ENST00000533928 CCDC85AQ96PX6 553 aaPredicted RBP6.65□□□□□ -1.34
USP33-218ENST00000533928 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
USP33-218ENST00000533928 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
USP33-218ENST00000533928 EIF2AK4Q9P2K8 1649 aaKnown RBP6.65□□□□□ -1.35
USP33-218ENST00000533928 XAGE2Q96GT9 111 aa6.64□□□□□ -1.35
USP33-218ENST00000533928 ZSCAN10Q96SZ4 725 aaPredicted RBP6.64□□□□□ -1.35
USP33-218ENST00000533928 HRH3Q9Y5N1 445 aa6.64□□□□□ -1.35
USP33-218ENST00000533928 MYOM3Q5VTT5 1437 aa6.64□□□□□ -1.35
USP33-218ENST00000533928 MBD5Q9P267 1494 aa6.64□□□□□ -1.35
USP33-218ENST00000533928 MADDQ8WXG6 1647 aa6.64□□□□□ -1.35
USP33-218ENST00000533928 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 PTPRMP28827 1452 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
USP33-218ENST00000533928 CAMSAP2Q08AD1 1489 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 TSGA10IPQ3SY00 556 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 ZC3H13Q5T200 1668 aaKnown RBP6.63□□□□□ -1.35
USP33-218ENST00000533928 TMEM214Q6NUQ4 689 aaKnown RBP6.63□□□□□ -1.35
USP33-218ENST00000533928 PODNQ7Z5L7 613 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 LRRC4BQ9NT99 713 aa6.63□□□□□ -1.35
USP33-218ENST00000533928 CFDP1Q9UEE9 299 aaPredicted RBP6.63□□□□□ -1.35
USP33-218ENST00000533928 CROCC2H7BZ55 1655 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 TCOF1Q13428 1488 aaKnown RBP6.62□□□□□ -1.35
USP33-218ENST00000533928 YEATS2Q9ULM3 1422 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 A0A1B0GTH6 734 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 THBS1P07996 1170 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 MAP2K3P46734 347 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 GNASQ5JWF2 1037 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 DCAF5Q96JK2 942 aa6.62□□□□□ -1.35
USP33-218ENST00000533928 FHDC1Q9C0D6 1143 aaPredicted RBP6.62□□□□□ -1.35
USP33-218ENST00000533928 PREX1Q8TCU6 1659 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 A2MP01023 1474 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 NPATQ14207 1427 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 TRAPPC8Q9Y2L5 1435 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 OIP5O43482 229 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 EIF4G2P78344 907 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP33-218ENST00000533928 USP4Q13107 963 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 ESCO1Q5FWF5 840 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 OXCT2Q9BYC2 517 aaPredicted RBP6.61□□□□□ -1.35
USP33-218ENST00000533928 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
USP33-218ENST00000533928 RIMS1Q86UR5 1692 aaKnown RBP6.61□□□□□ -1.35
USP33-218ENST00000533928 RNF17Q9BXT8 1623 aaKnown RBP6.61□□□□□ -1.35
USP33-218ENST00000533928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP33-218ENST00000533928 SPAG9O60271 1321 aaKnown RBP6.6□□□□□ -1.35
USP33-218ENST00000533928 CSB-PGBD3P0DP91 1061 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 IRF5Q13568 498 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 PLA2G4EQ3MJ16 856 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 C4orf17Q53FE4 359 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 PGBD3Q8N328 593 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 KLRG1Q96E93 195 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 RUBCNLQ9H714 662 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 PRM3Q9NNZ6 103 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
USP33-218ENST00000533928 DNMT1P26358 1616 aaKnown RBP6.6□□□□□ -1.35
USP33-218ENST00000533928 SIGLEC1Q9BZZ2 1709 aa6.59□□□□□ -1.35
USP33-218ENST00000533928 MSTNO14793 375 aa6.59□□□□□ -1.35
USP33-218ENST00000533928 STAU1O95793 577 aaKnown RBP6.59□□□□□ -1.35
USP33-218ENST00000533928 MSX1P28360 303 aa6.59□□□□□ -1.35
USP33-218ENST00000533928 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
USP33-218ENST00000533928 KDM5DQ9BY66 1539 aa6.59□□□□□ -1.35
USP33-218ENST00000533928 ERBINQ96RT1 1412 aa6.59□□□□□ -1.36
USP33-218ENST00000533928 ZNF142P52746 1687 aaPredicted RBP6.58□□□□□ -1.36
USP33-218ENST00000533928 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
USP33-218ENST00000533928 UBAP2LQ14157 1087 aaKnown RBP6.58□□□□□ -1.36
USP33-218ENST00000533928 LBRQ14739 615 aaKnown RBP6.58□□□□□ -1.36
USP33-218ENST00000533928 RNF135Q8IUD6 432 aa6.58□□□□□ -1.36
USP33-218ENST00000533928 GALNT6Q8NCL4 622 aa6.58□□□□□ -1.36
USP33-218ENST00000533928 ETNK1Q9HBU6 452 aa6.58□□□□□ -1.36
USP33-218ENST00000533928 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
USP33-218ENST00000533928 DUOX2Q9NRD8 1548 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms