RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 JMYQ8N9B5 988 aa24.12■■□□□ 1.45
UBXN1-216ENST00000533908 TIAM2Q8IVF5 1701 aa24.11■■□□□ 1.45
UBXN1-216ENST00000533908 SNRPA1P09661 255 aaKnown RBP24.11■■□□□ 1.45
UBXN1-216ENST00000533908 NPM2Q86SE8 214 aaKnown RBP24.11■■□□□ 1.45
UBXN1-216ENST00000533908 RTF1Q92541 710 aaKnown RBP24.11■■□□□ 1.45
UBXN1-216ENST00000533908 SLX4Q8IY92 1834 aa24.11■■□□□ 1.45
UBXN1-216ENST00000533908 FER1L6Q2WGJ9 1857 aa24.11■■□□□ 1.45
UBXN1-216ENST00000533908 BCORQ6W2J9 1755 aa24.1■■□□□ 1.45
UBXN1-216ENST00000533908 ERFEQ4G0M1 354 aa24.09■■□□□ 1.45
UBXN1-216ENST00000533908 STYK1Q6J9G0 422 aa24.09■■□□□ 1.45
UBXN1-216ENST00000533908 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
UBXN1-216ENST00000533908 PRPF40BQ6NWY9 871 aaKnown RBP24.08■■□□□ 1.45
UBXN1-216ENST00000533908 CLEC4GQ6UXB4 293 aa24.08■■□□□ 1.45
UBXN1-216ENST00000533908 CNKSR1Q969H4 720 aa24.08■■□□□ 1.45
UBXN1-216ENST00000533908 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
UBXN1-216ENST00000533908 ST5P78524 1137 aa24.07■■□□□ 1.44
UBXN1-216ENST00000533908 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
UBXN1-216ENST00000533908 MASTLQ96GX5 879 aa24.07■■□□□ 1.44
UBXN1-216ENST00000533908 LTBP3Q9NS15 1303 aa24.07■■□□□ 1.44
UBXN1-216ENST00000533908 NPHP1O15259 732 aa24.06■■□□□ 1.44
UBXN1-216ENST00000533908 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
UBXN1-216ENST00000533908 DPY19L2Q6NUT2 758 aa24.06■■□□□ 1.44
UBXN1-216ENST00000533908 NBPF5PQ86XG9 351 aaPredicted RBP24.06■■□□□ 1.44
UBXN1-216ENST00000533908 DICER1Q9UPY3 1922 aaKnown RBP24.06■■□□□ 1.44
UBXN1-216ENST00000533908 TAOK3Q9H2K8 898 aa24.05■■□□□ 1.44
UBXN1-216ENST00000533908 KLRG2A4D1S0 409 aaPredicted RBP24.04■■□□□ 1.44
UBXN1-216ENST00000533908 HLFQ16534 295 aa24.04■■□□□ 1.44
UBXN1-216ENST00000533908 CACNA1SQ13698 1873 aa24.03■■□□□ 1.44
UBXN1-216ENST00000533908 DDNO94850 711 aaPredicted RBP24.03■■□□□ 1.44
UBXN1-216ENST00000533908 NIP7Q9Y221 180 aaKnown RBP eCLIP24.03■■□□□ 1.44
UBXN1-216ENST00000533908 FAM177BA6PVY3 158 aa24.02■■□□□ 1.44
UBXN1-216ENST00000533908 OLFM4Q6UX06 510 aa24.02■■□□□ 1.44
UBXN1-216ENST00000533908 ZNF652Q9Y2D9 606 aa24.02■■□□□ 1.44
UBXN1-216ENST00000533908 POTEIP0CG38 1075 aa24.01■■□□□ 1.43
UBXN1-216ENST00000533908 POTEJP0CG39 1038 aa24.01■■□□□ 1.43
UBXN1-216ENST00000533908 COL13A1Q5TAT6 717 aaPredicted RBP24.01■■□□□ 1.43
UBXN1-216ENST00000533908 NPR1P16066 1061 aa24■■□□□ 1.43
UBXN1-216ENST00000533908 TPTE2Q6XPS3 522 aa24■■□□□ 1.43
UBXN1-216ENST00000533908 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
UBXN1-216ENST00000533908 ARFGEF2Q9Y6D5 1785 aa24■■□□□ 1.43
UBXN1-216ENST00000533908 RGL2O15211 777 aa23.99■■□□□ 1.43
UBXN1-216ENST00000533908 SOGA3Q5TF21 947 aa23.98■■□□□ 1.43
UBXN1-216ENST00000533908 THUMPD2Q9BTF0 503 aaKnown RBP23.98■■□□□ 1.43
UBXN1-216ENST00000533908 NGEFQ8N5V2 710 aa23.97■■□□□ 1.43
UBXN1-216ENST00000533908 EIF4A1P60842 406 aaKnown RBP23.96■■□□□ 1.43
UBXN1-216ENST00000533908 CCDC93Q567U6 631 aa23.96■■□□□ 1.43
UBXN1-216ENST00000533908 DLG5Q8TDM6 1919 aa23.96■■□□□ 1.43
UBXN1-216ENST00000533908 CHADLQ6NUI6 762 aa23.95■■□□□ 1.42
UBXN1-216ENST00000533908 TTLL7Q6ZT98 887 aa23.95■■□□□ 1.42
UBXN1-216ENST00000533908 ZNF277Q9NRM2 450 aaPredicted RBP23.94■■□□□ 1.42
UBXN1-216ENST00000533908 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
UBXN1-216ENST00000533908 FKBP4Q02790 459 aaKnown RBP eCLIP23.93■■□□□ 1.42
UBXN1-216ENST00000533908 PCNTO95613 3336 aa23.93■■□□□ 1.42
UBXN1-216ENST00000533908 KDM3BQ7LBC6 1761 aa23.93■■□□□ 1.42
UBXN1-216ENST00000533908 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
UBXN1-216ENST00000533908 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
UBXN1-216ENST00000533908 PNISRQ8TF01 805 aaKnown RBP23.92■■□□□ 1.42
UBXN1-216ENST00000533908 LAMB4A4D0S4 1761 aa23.91■■□□□ 1.42
UBXN1-216ENST00000533908 ZNF541Q9H0D2 1346 aa23.91■■□□□ 1.42
UBXN1-216ENST00000533908 ERVV-1B6SEH8 477 aa23.91■■□□□ 1.42
UBXN1-216ENST00000533908 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
UBXN1-216ENST00000533908 ABCC12Q96J65 1359 aa23.91■■□□□ 1.42
UBXN1-216ENST00000533908 MAP3K15Q6ZN16 1313 aa23.9■■□□□ 1.42
UBXN1-216ENST00000533908 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
UBXN1-216ENST00000533908 TAF1DQ9H5J8 278 aaPredicted RBP23.9■■□□□ 1.42
UBXN1-216ENST00000533908 MYL6BP14649 208 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 ALDH1B1P30837 517 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 CRY2Q49AN0 593 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 RTKN2Q8IZC4 609 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 SYNE4Q8N205 404 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 NUP98P52948 1817 aa23.89■■□□□ 1.41
UBXN1-216ENST00000533908 UBN2Q6ZU65 1347 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 SNED1Q8TER0 1413 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 NEFMP07197 916 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
UBXN1-216ENST00000533908 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
UBXN1-216ENST00000533908 GPTP24298 496 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 ZBTB3Q9H5J0 574 aa23.88■■□□□ 1.41
UBXN1-216ENST00000533908 SUSD4Q5VX71 490 aa23.87■■□□□ 1.41
UBXN1-216ENST00000533908 IQCA1LA6NCM1 817 aa23.86■■□□□ 1.41
UBXN1-216ENST00000533908 IARSP41252 1262 aaKnown RBP23.86■■□□□ 1.41
UBXN1-216ENST00000533908 ZNF34Q8IZ26 560 aa23.86■■□□□ 1.41
UBXN1-216ENST00000533908 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
UBXN1-216ENST00000533908 CREBZFQ9NS37 354 aa23.86■■□□□ 1.41
UBXN1-216ENST00000533908 MKRN1Q9UHC7 482 aaKnown RBP23.86■■□□□ 1.41
UBXN1-216ENST00000533908 PASKQ96RG2 1323 aa23.85■■□□□ 1.41
UBXN1-216ENST00000533908 FZD9O00144 591 aa23.85■■□□□ 1.41
UBXN1-216ENST00000533908 LDHDQ86WU2 507 aa23.85■■□□□ 1.41
UBXN1-216ENST00000533908 SCN4AP35499 1836 aa23.84■■□□□ 1.41
UBXN1-216ENST00000533908 ITGBL1O95965 494 aaPredicted RBP23.84■■□□□ 1.41
UBXN1-216ENST00000533908 HOXA10P31260 410 aaPredicted RBP23.84■■□□□ 1.41
UBXN1-216ENST00000533908 KIF6Q6ZMV9 814 aa23.84■■□□□ 1.41
UBXN1-216ENST00000533908 C3orf67Q6ZVT6 689 aa23.84■■□□□ 1.41
UBXN1-216ENST00000533908 LRP10Q7Z4F1 713 aa23.84■■□□□ 1.41
UBXN1-216ENST00000533908 PDIA6Q15084 440 aa23.83■■□□□ 1.41
UBXN1-216ENST00000533908 COL4A5P29400 1685 aa23.83■■□□□ 1.4
UBXN1-216ENST00000533908 EAPPQ56P03 285 aaPredicted RBP23.82■■□□□ 1.4
UBXN1-216ENST00000533908 PSMD1Q99460 953 aa23.82■■□□□ 1.4
UBXN1-216ENST00000533908 HACL1Q9UJ83 578 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms