RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 VPS53Q5VIR6 699 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 FUCA2Q9BTY2 467 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 CWC27Q6UX04 472 aaKnown RBP19.94■□□□□ 0.78
CTSB-228ENST00000533455 ZSCAN31Q96LW9 406 aaPredicted RBP19.94■□□□□ 0.78
CTSB-228ENST00000533455 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
CTSB-228ENST00000533455 SH2B1Q9NRF2 756 aaPredicted RBP19.93■□□□□ 0.78
CTSB-228ENST00000533455 LARGE1O95461 756 aa19.93■□□□□ 0.78
CTSB-228ENST00000533455 ADCY5O95622 1261 aa19.93■□□□□ 0.78
CTSB-228ENST00000533455 HCLS1P14317 486 aaPredicted RBP19.93■□□□□ 0.78
CTSB-228ENST00000533455 CASTP20810 708 aaKnown RBP19.93■□□□□ 0.78
CTSB-228ENST00000533455 DIAPH3Q9NSV4 1193 aa19.93■□□□□ 0.78
CTSB-228ENST00000533455 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
CTSB-228ENST00000533455 ADCY9O60503 1353 aa19.93■□□□□ 0.78
CTSB-228ENST00000533455 ZSWIM6Q9HCJ5 1215 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 CHPF2Q9P2E5 772 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 MTMR6Q9Y217 621 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 PI4KAP2A4QPH2 592 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 PI4KAP1Q8N8J0 262 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 MYRIPQ8NFW9 859 aa19.92■□□□□ 0.78
CTSB-228ENST00000533455 KDM4AO75164 1064 aa19.91■□□□□ 0.78
CTSB-228ENST00000533455 GJB2P29033 226 aa19.91■□□□□ 0.78
CTSB-228ENST00000533455 PRIMPOLQ96LW4 560 aa19.91■□□□□ 0.78
CTSB-228ENST00000533455 PDRG1Q9NUG6 133 aa19.91■□□□□ 0.78
CTSB-228ENST00000533455 PHRF1Q9P1Y6 1649 aaKnown RBP19.9■□□□□ 0.78
CTSB-228ENST00000533455 NFAT5O94916 1531 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 FIBPO43427 364 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 EIF2S2P20042 333 aaKnown RBP19.9■□□□□ 0.78
CTSB-228ENST00000533455 LTV1Q96GA3 475 aaPredicted RBP19.9■□□□□ 0.78
CTSB-228ENST00000533455 ECHDC1Q9NTX5 307 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 PTH1RQ03431 593 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 CCDC83Q8IWF9 413 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 CLASRPQ8N2M8 674 aaKnown RBP19.9■□□□□ 0.78
CTSB-228ENST00000533455 SPTLC3Q9NUV7 552 aa19.9■□□□□ 0.78
CTSB-228ENST00000533455 NOLC1Q14978 699 aaKnown RBP eCLIP19.89■□□□□ 0.774e-15■□□□□ 10.7
CTSB-228ENST00000533455 PKNOX2Q96KN3 472 aa19.89■□□□□ 0.77
CTSB-228ENST00000533455 JAKMIP1Q96N16 626 aaKnown RBP19.89■□□□□ 0.77
CTSB-228ENST00000533455 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.77
CTSB-228ENST00000533455 CYP46A1Q9Y6A2 500 aa19.89■□□□□ 0.77
CTSB-228ENST00000533455 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
CTSB-228ENST00000533455 ALDH1L1O75891 902 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 PDIA4P13667 645 aaKnown RBP19.88■□□□□ 0.77
CTSB-228ENST00000533455 CPA1P15085 419 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
CTSB-228ENST00000533455 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 OS9Q13438 667 aaPredicted RBP19.88■□□□□ 0.77
CTSB-228ENST00000533455 NUTM2GQ5VZR2 741 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 ERC1Q8IUD2 1116 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 ABTB2Q8N961 1025 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 GPATCH3Q96I76 525 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 NECTIN1Q15223 517 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 ADCK5Q3MIX3 580 aa19.88■□□□□ 0.77
CTSB-228ENST00000533455 RGPD2P0DJD1 1756 aa19.87■□□□□ 0.77
CTSB-228ENST00000533455 CCDC171Q6TFL3 1326 aa19.87■□□□□ 0.77
CTSB-228ENST00000533455 HMGN5P82970 282 aaKnown RBP19.87■□□□□ 0.77
CTSB-228ENST00000533455 DNM1Q05193 864 aaKnown RBP19.87■□□□□ 0.77
CTSB-228ENST00000533455 PRPF40BQ6NWY9 871 aaKnown RBP19.87■□□□□ 0.77
CTSB-228ENST00000533455 IP6K1Q92551 441 aa19.87■□□□□ 0.77
CTSB-228ENST00000533455 EVI5LQ96CN4 794 aa19.87■□□□□ 0.77
CTSB-228ENST00000533455 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.77
CTSB-228ENST00000533455 LGR6Q9HBX8 967 aa19.86■□□□□ 0.77
CTSB-228ENST00000533455 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
CTSB-228ENST00000533455 OVOS2A0A0G2JMS6 1433 aa19.86■□□□□ 0.77
CTSB-228ENST00000533455 ZNF830Q96NB3 372 aaPredicted RBP19.86■□□□□ 0.77
CTSB-228ENST00000533455 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
CTSB-228ENST00000533455 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
CTSB-228ENST00000533455 TPM3P06753 285 aa19.85■□□□□ 0.77
CTSB-228ENST00000533455 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
CTSB-228ENST00000533455 TTC12Q9H892 705 aaPredicted RBP19.85■□□□□ 0.77
CTSB-228ENST00000533455 HIP1O00291 1037 aa19.85■□□□□ 0.77
CTSB-228ENST00000533455 ME3Q16798 604 aa19.85■□□□□ 0.77
CTSB-228ENST00000533455 DNTTIP2Q5QJE6 756 aaKnown RBP19.85■□□□□ 0.77
CTSB-228ENST00000533455 DBF4Q9UBU7 674 aaPredicted RBP19.85■□□□□ 0.77
CTSB-228ENST00000533455 KCNQ3O43525 872 aa19.84■□□□□ 0.77
CTSB-228ENST00000533455 IFIT2P09913 472 aaKnown RBP19.84■□□□□ 0.77
CTSB-228ENST00000533455 ZKSCAN1P17029 563 aaPredicted RBP19.84■□□□□ 0.77
CTSB-228ENST00000533455 ELP1O95163 1332 aa19.84■□□□□ 0.77
CTSB-228ENST00000533455 AKAP4Q5JQC9 854 aa19.83■□□□□ 0.77
CTSB-228ENST00000533455 NBPF6Q5VWK0 638 aa19.83■□□□□ 0.77
CTSB-228ENST00000533455 NBPF4Q96M43 638 aa19.83■□□□□ 0.77
CTSB-228ENST00000533455 RBM8AQ9Y5S9 174 aaKnown RBP19.83■□□□□ 0.77
CTSB-228ENST00000533455 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
CTSB-228ENST00000533455 CREB3L3Q68CJ9 461 aa19.83■□□□□ 0.76
CTSB-228ENST00000533455 MAP4K1Q92918 833 aa19.83■□□□□ 0.76
CTSB-228ENST00000533455 HEG1Q9ULI3 1381 aa19.82■□□□□ 0.76
CTSB-228ENST00000533455 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
CTSB-228ENST00000533455 ANXA1P04083 346 aa19.82■□□□□ 0.76
CTSB-228ENST00000533455 MPNDQ8N594 471 aa19.82■□□□□ 0.76
CTSB-228ENST00000533455 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
CTSB-228ENST00000533455 AP5Z1O43299 807 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 CCDC192P0DO97 292 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 TEFQ10587 303 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 ALDH8A1Q9H2A2 487 aaPredicted RBP19.81■□□□□ 0.76
CTSB-228ENST00000533455 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 JCADQ9P266 1359 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 PSMA5P28066 241 aa19.81■□□□□ 0.76
CTSB-228ENST00000533455 C9orf78Q9NZ63 289 aaPredicted RBP19.81■□□□□ 0.76
CTSB-228ENST00000533455 TPCN1Q9ULQ1 816 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms