RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
CTSB-227ENST00000533110 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
CTSB-227ENST00000533110 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
CTSB-227ENST00000533110 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
CTSB-227ENST00000533110 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
CTSB-227ENST00000533110 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
CTSB-227ENST00000533110 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CTSB-227ENST00000533110 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 SRGNP10124 158 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 CYP4F22Q6NT55 531 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 MCOLN1Q9GZU1 580 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
CTSB-227ENST00000533110 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 ADAMTSL1Q8N6G6 1762 aa12.63□□□□□ -0.39
CTSB-227ENST00000533110 MRC1P22897 1456 aa12.62□□□□□ -0.39
CTSB-227ENST00000533110 CA12O43570 354 aa12.62□□□□□ -0.39
CTSB-227ENST00000533110 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
CTSB-227ENST00000533110 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTSB-227ENST00000533110 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
CTSB-227ENST00000533110 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
CTSB-227ENST00000533110 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
CTSB-227ENST00000533110 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
CTSB-227ENST00000533110 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
CTSB-227ENST00000533110 GPC2Q8N158 579 aa12.61□□□□□ -0.39
CTSB-227ENST00000533110 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
CTSB-227ENST00000533110 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
CTSB-227ENST00000533110 MAP2K2P36507 400 aa12.6□□□□□ -0.39
CTSB-227ENST00000533110 DGKZQ13574 1117 aa12.6□□□□□ -0.39
CTSB-227ENST00000533110 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
CTSB-227ENST00000533110 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
CTSB-227ENST00000533110 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
CTSB-227ENST00000533110 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
CTSB-227ENST00000533110 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
CTSB-227ENST00000533110 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.39
CTSB-227ENST00000533110 FZD9O00144 591 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 AOC2O75106 756 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 NPR1P16066 1061 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
CTSB-227ENST00000533110 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
CTSB-227ENST00000533110 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 LTBP1Q14766 1721 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 TLL2Q9Y6L7 1015 aa12.58□□□□□ -0.4
CTSB-227ENST00000533110 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
CTSB-227ENST00000533110 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
CTSB-227ENST00000533110 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
CTSB-227ENST00000533110 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
CTSB-227ENST00000533110 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTSB-227ENST00000533110 TRAF5O00463 557 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 BRPF1P55201 1214 aaPredicted RBP12.55□□□□□ -0.4
CTSB-227ENST00000533110 PRPF38BQ5VTL8 546 aaKnown RBP12.55□□□□□ -0.4
CTSB-227ENST00000533110 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
CTSB-227ENST00000533110 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
CTSB-227ENST00000533110 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
CTSB-227ENST00000533110 CST9Q5W186 159 aa12.54□□□□□ -0.4
CTSB-227ENST00000533110 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
CTSB-227ENST00000533110 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
CTSB-227ENST00000533110 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
CTSB-227ENST00000533110 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
CTSB-227ENST00000533110 IL13P35225 146 aa12.53□□□□□ -0.4
CTSB-227ENST00000533110 SOX10P56693 466 aa12.53□□□□□ -0.4
CTSB-227ENST00000533110 TEFQ10587 303 aa12.53□□□□□ -0.4
CTSB-227ENST00000533110 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
CTSB-227ENST00000533110 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
CTSB-227ENST00000533110 EPS15P42566 896 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 SCNN1DP51172 638 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 PSMD1Q99460 953 aa12.52□□□□□ -0.41
CTSB-227ENST00000533110 A1BGP04217 495 aa12.51□□□□□ -0.41
CTSB-227ENST00000533110 HMOX1P09601 288 aa12.51□□□□□ -0.41
CTSB-227ENST00000533110 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
CTSB-227ENST00000533110 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
CTSB-227ENST00000533110 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
CTSB-227ENST00000533110 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
CTSB-227ENST00000533110 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
CTSB-227ENST00000533110 NOGQ13253 232 aa12.5□□□□□ -0.41
CTSB-227ENST00000533110 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CTSB-227ENST00000533110 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
CTSB-227ENST00000533110 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
CTSB-227ENST00000533110 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
CTSB-227ENST00000533110 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
CTSB-227ENST00000533110 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
CTSB-227ENST00000533110 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
CTSB-227ENST00000533110 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTSB-227ENST00000533110 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
CTSB-227ENST00000533110 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
CTSB-227ENST00000533110 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
CTSB-227ENST00000533110 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
CTSB-227ENST00000533110 PANK3Q9H999 370 aa12.48□□□□□ -0.41
CTSB-227ENST00000533110 CASP8AP2Q9UKL3 1982 aa12.48□□□□□ -0.41
CTSB-227ENST00000533110 COL4A5P29400 1685 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms